RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= 537021.9.peg.1044_1 (42 letters) >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 23.7 bits (51), Expect = 9.6 Identities = 6/26 (23%), Positives = 13/26 (50%), Gaps = 6/26 (23%) Query: 15 STSYELEKISENYQLS-KIVSLLFFL 39 + S+E + K +++LFF+ Sbjct: 286 TDSWE-----SFFVSVRKAITVLFFI 306 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.318 0.137 0.364 Gapped Lambda K H 0.267 0.0637 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 308,132 Number of extensions: 7087 Number of successful extensions: 10 Number of sequences better than 10.0: 1 Number of HSP's gapped: 10 Number of HSP's successfully gapped: 3 Length of query: 42 Length of database: 5,693,230 Length adjustment: 15 Effective length of query: 27 Effective length of database: 5,329,570 Effective search space: 143898390 Effective search space used: 143898390 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.2 bits)