BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 537021.9.peg.1044_1 (42 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >537021.9.peg.1044_1 Length = 42 Score = 82.0 bits (201), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 42/42 (100%), Positives = 42/42 (100%) Query: 1 LILLNSNGSKPYYLSTSYELEKISENYQLSKIVSLLFFLRDR 42 LILLNSNGSKPYYLSTSYELEKISENYQLSKIVSLLFFLRDR Sbjct: 1 LILLNSNGSKPYYLSTSYELEKISENYQLSKIVSLLFFLRDR 42 >gi|254780182|ref|YP_003064595.1| DNA gyrase subunit A [Candidatus Liberibacter asiaticus str. psy62] Length = 910 Score = 20.4 bits (41), Expect = 5.7, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 16/25 (64%) Query: 11 PYYLSTSYELEKISENYQLSKIVSL 35 PY ++ + LEKI+E + +IV + Sbjct: 272 PYQVNKAAMLEKIAELVREKRIVDI 296 >gi|254780902|ref|YP_003065315.1| isocitrate dehydrogenase [Candidatus Liberibacter asiaticus str. psy62] Length = 412 Score = 20.0 bits (40), Expect = 7.9, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 8 GSKPYYLSTSYELEKISEN 26 G + +LST+ +EKIS+N Sbjct: 379 GPEQDWLSTTDFIEKISDN 397 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.318 0.137 0.364 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,948 Number of Sequences: 1233 Number of extensions: 534 Number of successful extensions: 5 Number of sequences better than 100.0: 5 Number of HSP's better than 100.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of query: 42 length of database: 328,796 effective HSP length: 16 effective length of query: 26 effective length of database: 309,068 effective search space: 8035768 effective search space used: 8035768 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (20.8 bits) S2: 31 (16.5 bits)