Query         537021.9.peg.1058_1
Match_columns 37
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 33803
Date          Wed May 25 05:10:11 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_1058.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >2a7u_A ATP synthase alpha cha  12.9      97  0.0029   15.3   1.5   15   22-36      3-17  (26)
  2 >1lm5_A Subdomain of desmoplak  12.3      66  0.0019   16.1   0.5   18   18-35     16-33  (87)
  3 >2iuk_A SEED lipoxygenase; iro  12.0      35   0.001   17.3  -1.0   29    7-35      2-30  (31)
  4 >1gff_3 Bacteriophage G4 capsi   8.4      95  0.0028   15.3   0.1   13   13-25      2-14  (26)
  5 >2v7y_A Chaperone protein DNAK   7.1 1.1E+02  0.0033   15.0  -0.0   27    4-30     39-65  (73)
  6 >1f8n_A Lipoxygenase-1; dioxyg   6.9      74  0.0022   15.8  -1.0   28    8-35      2-29  (30)
  7 >1cks_A Cyclin-dependent kinas   4.7 3.1E+02  0.0091   13.0   1.1   11    8-18     21-31  (31)
  8 >3drw_A ADP-specific phosphofr   4.7 2.7E+02   0.008   13.2   0.8   13    1-13    102-114 (132)
  9 >2jc9_A Cytosolic purine 5'-nu   4.6 1.7E+02  0.0052   14.1  -0.2   18   18-36     21-38  (72)
 10 >1z5h_A Tricorn protease inter   4.6 3.3E+02  0.0099   12.8   1.2   17   19-35     74-90  (109)

No 1  
>>2a7u_A ATP synthase alpha chain; alpha helix bundle, hydrolase; NMR {Synthetic} (A:)
Probab=12.91  E-value=97  Score=15.29  Aligned_cols=15  Identities=53%  Similarity=0.612  Sum_probs=11.5

Q ss_pred             CCCCCHHHHHHHHHC
Q ss_conf             367006676786533
Q 537021.9.peg.1   22 LSKPSISEGIKKRIR   36 (37)
Q Consensus        22 lskpsisegikkrir   36 (37)
                      |....|||-||.||.
T Consensus         3 lnsteiselikqria   17 (26)
T 2a7u_A            3 LNSTEISELIKQRIA   17 (26)
T ss_dssp             SSGGGGHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH
T ss_conf             763889999999988


No 2  
>>1lm5_A Subdomain of desmoplakin carboxy-terminal domain (DPCT); plakin repeat,, structural protein; 1.80A {Homo sapiens} (A:1-34,A:162-214)
Probab=12.29  E-value=66  Score=16.07  Aligned_cols=18  Identities=44%  Similarity=0.661  Sum_probs=13.6

Q ss_pred             HHHCCCCCCHHHHHHHHH
Q ss_conf             331036700667678653
Q 537021.9.peg.1   18 RSASLSKPSISEGIKKRI   35 (37)
Q Consensus        18 rsaslskpsisegikkri   35 (37)
                      ....|.|-||+|||...|
T Consensus        16 DTEnLEKIsItEGi~RGI   33 (87)
T 1lm5_A           16 DTENLEKISITEGIERGI   33 (87)
T ss_dssp             ETTTTEEECHHHHHHTTS
T ss_pred             ECCCCCEEEHHHHHHCCC
T ss_conf             889997875999998699


No 3  
>>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} (A:602-632)
Probab=12.01  E-value=35  Score=17.34  Aligned_cols=29  Identities=24%  Similarity=0.560  Sum_probs=22.4

Q ss_pred             CCEECHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             71231399985331036700667678653
Q 537021.9.peg.1    7 DEVIIPKKLIRRSASLSKPSISEGIKKRI   35 (37)
Q Consensus         7 deviipkklirrsaslskpsisegikkri   35 (37)
                      |+--.|..||+|.-....|+-..|++-.|
T Consensus         2 ~~qaLP~DLikRG~Av~Dp~~phglrLlI   30 (31)
T 2iuk_A            2 THQALPADLVKRGLAIEDPSAPHGLRLVI   30 (31)
T ss_dssp             GGSSHHHHHHHTTSEEECSSSTTSEEESS
T ss_pred             CCCCCHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             34668899997589765555643322457


No 4  
>>1gff_3 Bacteriophage G4 capsid proteins GPF, GPG, GPJ; coat protein, icosahedral virus; 3.00A {Enterobacteria phage G4} (3:)
Probab=8.37  E-value=95  Score=15.32  Aligned_cols=13  Identities=62%  Similarity=0.578  Sum_probs=10.2

Q ss_pred             HHHHHHHHCCCCC
Q ss_conf             9998533103670
Q 537021.9.peg.1   13 KKLIRRSASLSKP   25 (37)
Q Consensus        13 kklirrsaslskp   25 (37)
                      ||-||||..-||-
T Consensus         2 kksirrsggkskg   14 (26)
T 1gff_3            2 KKSIRRSGGKSKG   14 (26)
T ss_pred             CCHHHHCCCCCCC
T ss_conf             4113222787786


No 5  
>>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} (A:157-197,A:283-314)
Probab=7.12  E-value=1.1e+02  Score=15.03  Aligned_cols=27  Identities=22%  Similarity=0.351  Sum_probs=22.6

Q ss_pred             CCCCCEECHHHHHHHHHCCCCCCHHHH
Q ss_conf             025712313999853310367006676
Q 537021.9.peg.1    4 TLGDEVIIPKKLIRRSASLSKPSISEG   30 (37)
Q Consensus         4 tlgdeviipkklirrsaslskpsiseg   30 (37)
                      .||+..+-|-+-.-+.|.+++-.|.|=
T Consensus        39 ~LG~r~~~pv~~~L~da~l~~~dIdeV   65 (73)
T 2v7y_A           39 HLGERTMGPVRQALQDAGLTPADIDKV   65 (73)
T ss_dssp             TCSHTTHHHHHHHHHHHTCCGGGCSEE
T ss_pred             CCCHHHHHHHHHHHHHCCCCHHHCCEE
T ss_conf             758999999999999849998999589


No 6  
>>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} (A:577-606)
Probab=6.88  E-value=74  Score=15.82  Aligned_cols=28  Identities=29%  Similarity=0.636  Sum_probs=21.1

Q ss_pred             CEECHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             1231399985331036700667678653
Q 537021.9.peg.1    8 EVIIPKKLIRRSASLSKPSISEGIKKRI   35 (37)
Q Consensus         8 eviipkklirrsaslskpsisegikkri   35 (37)
                      |--.|..||+|.-....|+-..|++-.|
T Consensus         2 eqaLP~DLikRG~Av~Dp~~phGlrLlI   29 (30)
T 1f8n_A            2 DQALPADLIKRGVAIKDPSTPHGVRLLI   29 (30)
T ss_dssp             GGSHHHHHHHTTSEEECTTSTTSEEESS
T ss_pred             CCCCHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             5778899997599876556655543457


No 7  
>>1cks_A Cyclin-dependent kinase subunit, type 2; cell division; 2.10A {Homo sapiens} (A:1-31)
Probab=4.70  E-value=3.1e+02  Score=12.96  Aligned_cols=11  Identities=27%  Similarity=0.818  Sum_probs=8.2

Q ss_pred             CEECHHHHHHH
Q ss_conf             12313999853
Q 537021.9.peg.1    8 EVIIPKKLIRR   18 (37)
Q Consensus         8 eviipkklirr   18 (37)
                      .||+||.+.++
T Consensus        21 HViLPk~~aKk   31 (31)
T 1cks_A           21 HVMLPRELSKQ   31 (31)
T ss_dssp             CEECCHHHHHT
T ss_pred             EEEECHHHHHH
T ss_conf             99968899965


No 8  
>>3drw_A ADP-specific phosphofructokinase; AMP, cytoplasm, glycolysis, magnesium, metal-binding, transferase, structural genomics, PSI-2; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A (A:35-119,A:175-221)
Probab=4.66  E-value=2.7e+02  Score=13.22  Aligned_cols=13  Identities=54%  Similarity=0.751  Sum_probs=8.9

Q ss_pred             CCCCCCCCEECHH
Q ss_conf             9410257123139
Q 537021.9.peg.1    1 LEFTLGDEVIIPK   13 (37)
Q Consensus         1 leftlgdeviipk   13 (37)
                      ++|.||||.|+.+
T Consensus       102 ~~f~l~~~~i~~~  114 (132)
T 3drw_A          102 LKFKLGDETIEIP  114 (132)
T ss_dssp             CEEESSSCEEECC
T ss_pred             CEEECCCCEEECC
T ss_conf             8764478338668


No 9  
>>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2jcm_A* (A:406-477)
Probab=4.57  E-value=1.7e+02  Score=14.10  Aligned_cols=18  Identities=44%  Similarity=0.726  Sum_probs=11.2

Q ss_pred             HHHCCCCCCHHHHHHHHHC
Q ss_conf             3310367006676786533
Q 537021.9.peg.1   18 RSASLSKPSISEGIKKRIR   36 (37)
Q Consensus        18 rsaslskpsisegikkrir   36 (37)
                      -|+|-.+|.|+. |+++||
T Consensus        21 DssS~e~PDIs~-i~~~Ir   38 (72)
T 2jc9_A           21 DSSSNERPDISS-IQRRIK   38 (72)
T ss_dssp             --------------CHHHH
T ss_pred             HHHHCCCHHHHH-HHHHHH
T ss_conf             765313567799-999999


No 10 
>>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A (A:503-537,A:707-780)
Probab=4.55  E-value=3.3e+02  Score=12.78  Aligned_cols=17  Identities=29%  Similarity=0.438  Sum_probs=13.3

Q ss_pred             HHCCCCCCHHHHHHHHH
Q ss_conf             31036700667678653
Q 537021.9.peg.1   19 SASLSKPSISEGIKKRI   35 (37)
Q Consensus        19 saslskpsisegikkri   35 (37)
                      -++...|+++-||+|-+
T Consensus        74 ~~~I~sk~~n~Gi~KGl   90 (109)
T 1z5h_A           74 VRNIGSKNISMGLAKGI   90 (109)
T ss_dssp             HHTTCCTTSHHHHHHHH
T ss_pred             HHCCCCCCHHHHHHHHH
T ss_conf             84488853678999999


Done!