BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 537021.9.peg.1064_1
         (238 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|315122526|ref|YP_004063015.1| hypothetical protein CKC_03890 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495928|gb|ADR52527.1| hypothetical protein CKC_03890 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 389

 Score =  259 bits (661), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 130/241 (53%), Positives = 174/241 (72%), Gaps = 3/241 (1%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFI 60
           MGKQ++ L+PDPKA+AS+QLS N+ N+  N+ R N++ +TPDGI +Y   GVDK+ID F 
Sbjct: 1   MGKQQSFLSPDPKAVASMQLSENINNSLFNSSRANMNEITPDGILRYTQEGVDKMIDPFS 60

Query: 61  GREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPH-HHTHVNTTKDFP 119
           G+E+SIP Y +SY L P+ Q ++NR+N N++L S+LLTQR+Q+ +P   +  +N  +   
Sbjct: 61  GQELSIPRYSRSYELSPVAQDLYNRRNANHILFSNLLTQRLQNFMPSPQNNSMNLQQPLA 120

Query: 120 PQQLRDNDVPEKPN--ASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKL 177
                 N +PE  N  +  E+ + ILY+Y     QQYE   LDRLQ  L+QDREDLET+L
Sbjct: 121 IPDPAHNPIPEGTNHFSQPEQEEGILYDYGKNNGQQYENTLLDRLQPRLKQDREDLETRL 180

Query: 178 HNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHNLAQAQGL 237
            NQGL+ GSV+WNR IDE NRKL+D RLAA+LK+S+EQERLDN++EK AYFHN AQAQ  
Sbjct: 181 SNQGLMPGSVSWNRTIDENNRKLNDARLAALLKSSEEQERLDNMREKQAYFHNFAQAQSH 240

Query: 238 Q 238
           Q
Sbjct: 241 Q 241


>gi|227822435|ref|YP_002826407.1| hypothetical protein NGR_c18900 [Sinorhizobium fredii NGR234]
 gi|227341436|gb|ACP25654.1| hypothetical protein NGR_c18900 [Sinorhizobium fredii NGR234]
          Length = 453

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 124/240 (51%), Gaps = 12/240 (5%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFI 60
           MGK +A   PDPKA A+ Q + N+  A AN Y  N++++TPDG   Y  +   K  D   
Sbjct: 1   MGKSKAPTPPDPKATAAAQTATNIGTAVANGYMGNVNQVTPDGSLTYSYT-KQKWTDPLS 59

Query: 61  GREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQ---RIQDLL--PHHHTHVNTT 115
           G    +P    + +L  +Q +I  + +  +L L+ L T    R+ DLL  P   +     
Sbjct: 60  GNVYDLPVATATQTLSEMQDKIKKQNDQASLNLATLATSQSSRLNDLLGKPMDISKAPAA 119

Query: 116 KDFP----PQQLRDNDVPEKPNASLEERKEILYNYPT-MGSQQYEKAFLDRLQSSLQQDR 170
            D      PQ  + +  PE    S+     I  +Y T   + +YE A + RL   L++DR
Sbjct: 120 GDHSKLTLPQYQQFSAGPEL-QTSVGNAGNIARSYETDFDTSKYENALMARLNPQLERDR 178

Query: 171 EDLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHN 230
             LET+L NQGL  GS A+NRAIDE NR  +D R+AA+L A  EQ RL N+  + A F N
Sbjct: 179 AALETRLANQGLQPGSEAYNRAIDEANRTSNDARIAAVLNAGQEQTRLANLANQKASFEN 238


>gi|265985067|ref|ZP_06097802.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|264663659|gb|EEZ33920.1| conserved hypothetical protein [Brucella sp. 83/13]
          Length = 299

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 119/247 (48%), Gaps = 23/247 (9%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFI 60
           MGK +A  +PDPK  ++ Q   N+  A AN+Y  N++++TPDG   Y  +G+ K  D + 
Sbjct: 1   MGKSKAPKSPDPKETSAAQTGTNIGTAVANSYLNNVNQVTPDGSLTYSQTGMQKYYDPYT 60

Query: 61  GREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLL---TQRIQDLL---------PHH 108
           G+   IP +  +  L   QQ I ++++  NL L  L    + R+ DLL         P  
Sbjct: 61  GKSYDIPQFTATQQLSQQQQAIKDQEDATNLNLGKLANSQSSRLNDLLGKPFDLSGAPAA 120

Query: 109 HTHVNTTKDFPPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQ 168
               N T    PQ  +    P+   +  ++         +   Q+ E A + R+   L+Q
Sbjct: 121 GNAGNMTA---PQYQQYTGGPQLQTSYTDDF--------SADRQKVEDALMSRINPQLEQ 169

Query: 169 DREDLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYF 228
           DR  LE +L NQG++ GS A+  A+++  +  +D R+ A+L    EQ RL  +    A F
Sbjct: 170 DRSALEQRLANQGIMPGSKAFETAMNQNAQASNDARMQAILAGGQEQSRLAGLSRDQATF 229

Query: 229 HNLAQAQ 235
            N A  Q
Sbjct: 230 GNNANQQ 236


>gi|150397020|ref|YP_001327487.1| hypothetical protein Smed_1817 [Sinorhizobium medicae WSM419]
 gi|150028535|gb|ABR60652.1| hypothetical protein Smed_1817 [Sinorhizobium medicae WSM419]
          Length = 532

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 119/269 (44%), Gaps = 46/269 (17%)

Query: 9   APDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISIPH 68
           APDPK  AS Q + N+  A AN    N +++TPDG   Y T    K  D   G+E  +  
Sbjct: 10  APDPKQTASAQTATNIGTAVANNVMGNANQVTPDGNLTY-TYNTQKWTDPLSGKEYDLKV 68

Query: 69  YLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDL-----------------------L 105
              + +L P QQ I ++++   L L+ L   +   L                       L
Sbjct: 69  PTATQTLSPAQQAIKDQEDAAQLNLATLANTQSGKLNGLLASKFDISGAPAAGKSDAIGL 128

Query: 106 PHHHTHVNTTK------------------DFPPQQLRDNDVPEKPNASLEERKEILYNYP 147
           P + +  +  K                       Q+ D+    K   SL     I  +Y 
Sbjct: 129 PQYQSFTSGPKLQTSLANAGNVQSSIAGAGSIQSQVADSG---KIQTSLGNAGNITESYD 185

Query: 148 -TMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLA 206
             + + +YE+A +DRL   +++DR  LETKL NQGL  GS A++RA+DE NR  +D R+ 
Sbjct: 186 FDIDTSKYEQALMDRLSPQIERDRAALETKLTNQGLQPGSEAYDRAMDEANRAANDARIG 245

Query: 207 AMLKASDEQERLDNIQEKHAYFHNLAQAQ 235
           A L A  EQ R+  + +  A F N AQ Q
Sbjct: 246 ATLSAGQEQSRIAGLAQNQAQFQNSAQQQ 274


>gi|316933872|ref|YP_004108854.1| hypothetical protein Rpdx1_2530 [Rhodopseudomonas palustris DX-1]
 gi|315601586|gb|ADU44121.1| hypothetical protein Rpdx1_2530 [Rhodopseudomonas palustris DX-1]
          Length = 341

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 68/185 (36%), Gaps = 38/185 (20%)

Query: 9   APDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISIPH 68
           APDP   A  Q   NL           +D++TP G   Y  +G    + +  G+  ++P 
Sbjct: 9   APDPVKTAEAQGQMNLTTGVQQQLLNMVDQVTPTGSLTYSQNGTTSFVGA-DGKTYTVPR 67

Query: 69  YLQSYSLHPIQQQIHNRQNINNLLLSDLL---TQRIQDLLPHHHTHVNTTKDFPPQQLRD 125
           +  + +L P QQ + +  N     L  +    + +I  LL  +    N            
Sbjct: 68  FTSTQTLTPAQQALLDLSNKTQANLGQIGVDQSAKIGSLLGTNLKLGN------------ 115

Query: 126 NDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSG 185
               E   A L E          +GS         RL     Q  E L T+L NQG+  G
Sbjct: 116 ----EATEARLME----------LGSA--------RLDPKFAQSEEALRTRLANQGIQPG 153

Query: 186 SVAWN 190
           S AWN
Sbjct: 154 SAAWN 158


>gi|218510551|ref|ZP_03508429.1| hypothetical protein RetlB5_25766 [Rhizobium etli Brasil 5]
          Length = 271

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 18/187 (9%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +G   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTGKSTMTDQN-GKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
           ++P Y    +L P  Q I+++     L L+ L   + Q +     T+V+ +     + + 
Sbjct: 65  NLPVYSAYQTLSPQNQAIYDQSQQTQLGLAKLANDQTQKVSGILGTNVDLSSGNVDKYVN 124

Query: 125 D------NDVPEKPNASLEER---KEILYNYPTMGSQQYEKA---FLDRLQSSLQQDRED 172
           D      ++  ++  ASL++    K I      MGS  Y+ A   F  R Q++  Q   D
Sbjct: 125 DHWRAGFDNQWDREQASLDQSLADKGI-----AMGSAAYDNAMRDFTTRKQAAADQYLGD 179

Query: 173 LETKLHN 179
           + +   N
Sbjct: 180 MYSNAQN 186


>gi|319783503|ref|YP_004142979.1| hypothetical protein Mesci_3812 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
 gi|317169391|gb|ADV12929.1| hypothetical protein Mesci_3812 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
          Length = 330

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%)

Query: 13 KAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISIPHYLQS 72
          K  ++   + N+  A ANA   N++++TPDG   Y  +G  K  D + G+   IP Y  +
Sbjct: 13 KETSAASTATNVGTAIANANLGNVNQVTPDGSLNYSQTGTYKWNDPYTGKSYDIPTYTAT 72

Query: 73 YSLHPIQQQIHNRQNINNLLLSDL 96
           +L    Q I ++ +   L L +L
Sbjct: 73 QTLSGTGQAIKDQTDQAKLNLGEL 96


>gi|116253668|ref|YP_769506.1| hypothetical protein RL3928 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258316|emb|CAK09418.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 335

 Score = 43.9 bits (102), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 18/187 (9%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK SG   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVSGYQTMKDQN-GKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            +P Y    +  P  Q I+++     L LS L  ++   +     T+V+ +     +   
Sbjct: 65  QLPTYSAYQTYSPQNQAIYDQTQQTQLGLSKLANEQTGKISGILGTNVDLSAGNVDKYAN 124

Query: 125 D------NDVPEKPNASLEER---KEILYNYPTMGSQQYEKA---FLDRLQSSLQQDRED 172
           D      N+  ++  ASL++    K I     +MGS+ Y  A   F  R Q++  Q   D
Sbjct: 125 DHWQGGFNNQWDRDQASLDQSLADKGI-----SMGSEAYNNALRDFSTRKQAASDQFLGD 179

Query: 173 LETKLHN 179
           + +   N
Sbjct: 180 MYSNAQN 186


>gi|218673260|ref|ZP_03522929.1| hypothetical protein RetlG_17541 [Rhizobium etli GR56]
          Length = 334

 Score = 40.8 bits (94), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 18/187 (9%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +G   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTGYQTMKDQN-GKSY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            +P Y    +  P  Q I+++     L L+ L   +   +     T+V+ +     + + 
Sbjct: 65  QLPTYSAYQTYSPENQAIYDQTQQTQLGLARLANDQTGKISGILGTNVDLSAGNVDKYVN 124

Query: 125 D------NDVPEKPNASLEER---KEILYNYPTMGSQQYEKA---FLDRLQSSLQQDRED 172
           +      N+  ++  ASLE+    K I     +MGS  Y+ A   F  R Q++  Q   D
Sbjct: 125 NHWQSGFNNQWDRDQASLEQSLADKGI-----SMGSAAYDNAMRDFSTRKQAASDQYLGD 179

Query: 173 LETKLHN 179
           + +   N
Sbjct: 180 MYSNAQN 186


>gi|86356745|ref|YP_468637.1| hypothetical protein RHE_CH01103 [Rhizobium etli CFN 42]
 gi|86280847|gb|ABC89910.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 334

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 41/196 (20%)

Query: 9   APDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISIPH 68
           APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +G   + D   G+   +P 
Sbjct: 10  APDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTGYQTMTDQN-GKTYKLPT 68

Query: 69  YLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDV 128
           Y    +  P  Q I+++     L L+ L                             ND 
Sbjct: 69  YSAYQTYSPENQAIYDQTQQTQLGLARLA----------------------------NDQ 100

Query: 129 PEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQ----QDREDLETKLHNQGLVS 184
             K +        IL +   + +   +K   D  QS       +D+  LE  L ++G+  
Sbjct: 101 TAKVSG-------ILGSNVDLSAGNVDKYVNDHWQSGFNNQWDRDQASLEQSLADKGIAI 153

Query: 185 GSVAWNRAI-DETNRK 199
           GS A++ A+ D T RK
Sbjct: 154 GSAAYDNAMRDFTTRK 169


>gi|152982946|ref|YP_001353886.1| hypothetical protein mma_2196 [Janthinobacterium sp. Marseille]
 gi|151283023|gb|ABR91433.1| Hypothetical protein mma_2196 [Janthinobacterium sp. Marseille]
          Length = 305

 Score = 39.7 bits (91), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 151 SQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLK 210
            Q  + A + R Q  ++Q R+ L+ +L NQG+  GS A+N A+    +  +D+R  A L 
Sbjct: 138 GQTGQDALMARFQPQMEQSRKALDAQLANQGITQGSEAYNNAMRTQQQGENDLRSQAALN 197

Query: 211 A 211
            
Sbjct: 198 G 198


>gi|209548343|ref|YP_002280260.1| hypothetical protein Rleg2_0738 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534099|gb|ACI54034.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 334

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 22/189 (11%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA    +++ TPDG  +YK +G   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSYVNQYTPDGSLEYKVTGQQTMTDQN-GKTY 64

Query: 65  SIP--HYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQ 122
            IP     Q+YS  P  Q I+++     L L+ L   +   +     T+V+ +     + 
Sbjct: 65  QIPIRSAYQTYS--PQNQAIYDQTQQTQLGLAKLANDQTGKISGILGTNVDLSAGNVDKY 122

Query: 123 LRD------NDVPEKPNASLEER---KEILYNYPTMGSQQYEKA---FLDRLQSSLQQDR 170
           + D      N+  ++  ASL++    K I     +MGS  Y+ A   F  R Q++  Q  
Sbjct: 123 VNDHWQSGFNNQWDRDQASLDQSLADKGI-----SMGSAAYDNAMRDFSTRKQAASDQYL 177

Query: 171 EDLETKLHN 179
            D+ +   N
Sbjct: 178 GDMYSNAQN 186


>gi|149247691|ref|XP_001528254.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
 gi|146448208|gb|EDK42596.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
            YB-4239]
          Length = 1961

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 14/83 (16%)

Query: 151  SQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSG------------SVAWNRAIDETNR 198
            ++Q +  F+DRL+S+++ DRED+     N G V G            SV      DE +R
Sbjct: 1330 TKQDQDGFIDRLKSTIRIDREDIAFGAFN-GFVQGMAEFCSTLNYYASVPVGPEFDE-DR 1387

Query: 199  KLHDVRLAAMLKASDEQERLDNI 221
              H ++L A +KA+ + E  +  
Sbjct: 1388 MFHQIKLKAQIKAAGKPEYFNTF 1410


>gi|327191473|gb|EGE58493.1| hypothetical protein RHECNPAF_300003 [Rhizobium etli CNPAF512]
          Length = 335

 Score = 36.6 bits (83), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +    I+    G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTS-KSIMKDQNGKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLL---TQRIQDLL 105
            +P Y    +  P  Q I+++     L L+ L    T +I  +L
Sbjct: 65  ELPVYSAYQTYSPENQAIYDQTQQTQLGLARLANDQTGKISGIL 108


>gi|84688082|ref|ZP_01015940.1| Oligoendopeptidase F [Maritimibacter alkaliphilus HTCC2654]
 gi|84663910|gb|EAQ10416.1| Oligoendopeptidase F [Rhodobacterales bacterium HTCC2654]
          Length = 614

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 10/71 (14%)

Query: 156 KAFLDRLQSSL-QQDREDLETKLHNQGLVSGSVAWNRAIDETNRKL--------HDVRLA 206
           K   DRL++    Q  ++LE  LH+Q  V GS AWN+  DET  +L         D+ L 
Sbjct: 155 KPIFDRLRAMRPYQLSDELEKFLHDQSAV-GSAAWNKLFDETMARLTFSPEGEDEDLSLE 213

Query: 207 AMLKASDEQER 217
           A L    EQ+R
Sbjct: 214 ATLNLLSEQKR 224


Searching..................................................done


Results from round 2




>gi|315122526|ref|YP_004063015.1| hypothetical protein CKC_03890 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495928|gb|ADR52527.1| hypothetical protein CKC_03890 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 389

 Score =  309 bits (792), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 130/241 (53%), Positives = 174/241 (72%), Gaps = 3/241 (1%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFI 60
           MGKQ++ L+PDPKA+AS+QLS N+ N+  N+ R N++ +TPDGI +Y   GVDK+ID F 
Sbjct: 1   MGKQQSFLSPDPKAVASMQLSENINNSLFNSSRANMNEITPDGILRYTQEGVDKMIDPFS 60

Query: 61  GREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPH-HHTHVNTTKDFP 119
           G+E+SIP Y +SY L P+ Q ++NR+N N++L S+LLTQR+Q+ +P   +  +N  +   
Sbjct: 61  GQELSIPRYSRSYELSPVAQDLYNRRNANHILFSNLLTQRLQNFMPSPQNNSMNLQQPLA 120

Query: 120 PQQLRDNDVPEKPN--ASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKL 177
                 N +PE  N  +  E+ + ILY+Y     QQYE   LDRLQ  L+QDREDLET+L
Sbjct: 121 IPDPAHNPIPEGTNHFSQPEQEEGILYDYGKNNGQQYENTLLDRLQPRLKQDREDLETRL 180

Query: 178 HNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHNLAQAQGL 237
            NQGL+ GSV+WNR IDE NRKL+D RLAA+LK+S+EQERLDN++EK AYFHN AQAQ  
Sbjct: 181 SNQGLMPGSVSWNRTIDENNRKLNDARLAALLKSSEEQERLDNMREKQAYFHNFAQAQSH 240

Query: 238 Q 238
           Q
Sbjct: 241 Q 241


>gi|227822435|ref|YP_002826407.1| hypothetical protein NGR_c18900 [Sinorhizobium fredii NGR234]
 gi|227341436|gb|ACP25654.1| hypothetical protein NGR_c18900 [Sinorhizobium fredii NGR234]
          Length = 453

 Score =  249 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 124/240 (51%), Gaps = 12/240 (5%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFI 60
           MGK +A   PDPKA A+ Q + N+  A AN Y  N++++TPDG   Y  +   K  D   
Sbjct: 1   MGKSKAPTPPDPKATAAAQTATNIGTAVANGYMGNVNQVTPDGSLTYSYT-KQKWTDPLS 59

Query: 61  GREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQ---RIQDLL--PHHHTHVNTT 115
           G    +P    + +L  +Q +I  + +  +L L+ L T    R+ DLL  P   +     
Sbjct: 60  GNVYDLPVATATQTLSEMQDKIKKQNDQASLNLATLATSQSSRLNDLLGKPMDISKAPAA 119

Query: 116 KDFP----PQQLRDNDVPEKPNASLEERKEILYNYPT-MGSQQYEKAFLDRLQSSLQQDR 170
            D      PQ  + +  PE    S+     I  +Y T   + +YE A + RL   L++DR
Sbjct: 120 GDHSKLTLPQYQQFSAGPEL-QTSVGNAGNIARSYETDFDTSKYENALMARLNPQLERDR 178

Query: 171 EDLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHN 230
             LET+L NQGL  GS A+NRAIDE NR  +D R+AA+L A  EQ RL N+  + A F N
Sbjct: 179 AALETRLANQGLQPGSEAYNRAIDEANRTSNDARIAAVLNAGQEQTRLANLANQKASFEN 238


>gi|150397020|ref|YP_001327487.1| hypothetical protein Smed_1817 [Sinorhizobium medicae WSM419]
 gi|150028535|gb|ABR60652.1| hypothetical protein Smed_1817 [Sinorhizobium medicae WSM419]
          Length = 532

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 82/274 (29%), Positives = 120/274 (43%), Gaps = 46/274 (16%)

Query: 6   ASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREIS 65
           A  APDPK  AS Q + N+  A AN    N +++TPDG   Y  +   K  D   G+E  
Sbjct: 7   APEAPDPKQTASAQTATNIGTAVANNVMGNANQVTPDGNLTYTYN-TQKWTDPLSGKEYD 65

Query: 66  IPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDL--------------------- 104
           +     + +L P QQ I ++++   L L+ L   +   L                     
Sbjct: 66  LKVPTATQTLSPAQQAIKDQEDAAQLNLATLANTQSGKLNGLLASKFDISGAPAAGKSDA 125

Query: 105 --LPHHHTHVNTTK------------------DFPPQQLRDNDVPEKPNASLEERKEILY 144
             LP + +  +  K                       Q+ D+    K   SL     I  
Sbjct: 126 IGLPQYQSFTSGPKLQTSLANAGNVQSSIAGAGSIQSQVADSG---KIQTSLGNAGNITE 182

Query: 145 NYP-TMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSGSVAWNRAIDETNRKLHDV 203
           +Y   + + +YE+A +DRL   +++DR  LETKL NQGL  GS A++RA+DE NR  +D 
Sbjct: 183 SYDFDIDTSKYEQALMDRLSPQIERDRAALETKLTNQGLQPGSEAYDRAMDEANRAANDA 242

Query: 204 RLAAMLKASDEQERLDNIQEKHAYFHNLAQAQGL 237
           R+ A L A  EQ R+  + +  A F N AQ Q  
Sbjct: 243 RIGATLSAGQEQSRIAGLAQNQAQFQNSAQQQAY 276


>gi|265985067|ref|ZP_06097802.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|264663659|gb|EEZ33920.1| conserved hypothetical protein [Brucella sp. 83/13]
          Length = 299

 Score =  218 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 17/244 (6%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFI 60
           MGK +A  +PDPK  ++ Q   N+  A AN+Y  N++++TPDG   Y  +G+ K  D + 
Sbjct: 1   MGKSKAPKSPDPKETSAAQTGTNIGTAVANSYLNNVNQVTPDGSLTYSQTGMQKYYDPYT 60

Query: 61  GREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLL---TQRIQDLLPH------HHTH 111
           G+   IP +  +  L   QQ I ++++  NL L  L    + R+ DLL            
Sbjct: 61  GKSYDIPQFTATQQLSQQQQAIKDQEDATNLNLGKLANSQSSRLNDLLGKPFDLSGAPAA 120

Query: 112 VNTTKDFPPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDRE 171
            N      PQ  +    P+   +  ++         +   Q+ E A + R+   L+QDR 
Sbjct: 121 GNAGNMTAPQYQQYTGGPQLQTSYTDDF--------SADRQKVEDALMSRINPQLEQDRS 172

Query: 172 DLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHNL 231
            LE +L NQG++ GS A+  A+++  +  +D R+ A+L    EQ RL  +    A F N 
Sbjct: 173 ALEQRLANQGIMPGSKAFETAMNQNAQASNDARMQAILAGGQEQSRLAGLSRDQATFGNN 232

Query: 232 AQAQ 235
           A  Q
Sbjct: 233 ANQQ 236


>gi|316933872|ref|YP_004108854.1| hypothetical protein Rpdx1_2530 [Rhodopseudomonas palustris DX-1]
 gi|315601586|gb|ADU44121.1| hypothetical protein Rpdx1_2530 [Rhodopseudomonas palustris DX-1]
          Length = 341

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 72/216 (33%), Gaps = 38/216 (17%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFI 60
           M       APDP   A  Q   NL           +D++TP G   Y  +G    + +  
Sbjct: 1   MDTPEPPAAPDPVKTAEAQGQMNLTTGVQQQLLNMVDQVTPTGSLTYSQNGTTSFVGA-D 59

Query: 61  GREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLL---TQRIQDLLPHHHTHVNTTKD 117
           G+  ++P +  + +L P QQ + +  N     L  +    + +I  LL  +    N    
Sbjct: 60  GKTYTVPRFTSTQTLTPAQQALLDLSNKTQANLGQIGVDQSAKIGSLLGTNLKLGN---- 115

Query: 118 FPPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKL 177
                       E   A L E                      RL     Q  E L T+L
Sbjct: 116 ------------EATEARLMELGS------------------ARLDPKFAQSEEALRTRL 145

Query: 178 HNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASD 213
            NQG+  GS AWN  +   +   +D     +L    
Sbjct: 146 ANQGIQPGSAAWNAEMKSFSEGKNDAYNQLLLSGRQ 181


>gi|319783503|ref|YP_004142979.1| hypothetical protein Mesci_3812 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169391|gb|ADV12929.1| hypothetical protein Mesci_3812 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 330

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 32/219 (14%)

Query: 13  KAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISIPHYLQS 72
           K  ++   + N+  A ANA   N++++TPDG   Y  +G  K  D + G+   IP Y  +
Sbjct: 13  KETSAASTATNVGTAIANANLGNVNQVTPDGSLNYSQTGTYKWNDPYTGKSYDIPTYTAT 72

Query: 73  YSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKP 132
            +L    Q I ++ +   L L +L   +   L       V+ + D               
Sbjct: 73  QTLSGTGQAIKDQTDQAKLNLGELAAGQSSFLKDWLAKPVDLSND-------------AT 119

Query: 133 NASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSGSVAWNRA 192
              L +                    + RLQ +L   R+  E  L N+G+  GS  + +A
Sbjct: 120 EGRLMDLG------------------MKRLQPALDARRQANEADLINRGIRPGSDNYAQA 161

Query: 193 IDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHNL 231
            +  ++  +D    ++L +   Q   + + +  A  +NL
Sbjct: 162 QNIQDQGENDA-YNSLLLSGRGQAVQEALAQNSAPINNL 199


>gi|110632598|ref|YP_672806.1| hypothetical protein Meso_0237 [Mesorhizobium sp. BNC1]
 gi|110283582|gb|ABG61641.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 322

 Score = 98.4 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 80/238 (33%), Gaps = 53/238 (22%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N   A        I + TP G   Y+ +G   I D   G+ I
Sbjct: 2   KAPKAPDPWQTAAAQGAWNSFTAQQQQSMNMIGQNTPWGSLDYQQTGSTWITDP-TGKRI 60

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            +P Y  + +L P QQ I  R       L+ +                            
Sbjct: 61  EMPTYTANVNLSPEQQAIFERTQAAEGNLAQIA--------------------------- 93

Query: 125 DNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSL----QQDREDLETKLHNQ 180
                       E   E L       ++  E+   D     +    +Q+++ L T+L N 
Sbjct: 94  --------QDQSEWLGEYLQEPFEFNNRDAEEWVWDLASPRILQQQEQNQQALRTQLINS 145

Query: 181 GLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHNLAQAQGLQ 238
           GL  G+ AW            D  +  +  A+ +Q     +  +   F N A AQ  Q
Sbjct: 146 GLRPGTTAW------------DAEMTRLTNANTDQMNQLALTGRQMAF-NEALAQRNQ 190


>gi|218673260|ref|ZP_03522929.1| hypothetical protein RetlG_17541 [Rhizobium etli GR56]
          Length = 334

 Score = 97.7 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 35/212 (16%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +G   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTGYQTMKDQ-NGKSY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            +P Y    +  P  Q I+++     L L+ L   +   +     T+V+ +     +   
Sbjct: 65  QLPTYSAYQTYSPENQAIYDQTQQTQLGLARLANDQTGKISGILGTNVDLSAGNVDKY-- 122

Query: 125 DNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVS 184
                                            +     +   +D+  LE  L ++G+  
Sbjct: 123 -----------------------------VNNHWQSGFNNQWDRDQASLEQSLADKGISM 153

Query: 185 GSVAWNRAIDE---TNRKLHDVRLAAMLKASD 213
           GS A++ A+ +     +   D  L  M   + 
Sbjct: 154 GSAAYDNAMRDFSTRKQAASDQYLGDMYSNAQ 185


>gi|209548343|ref|YP_002280260.1| hypothetical protein Rleg2_0738 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534099|gb|ACI54034.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 334

 Score = 96.5 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 35/212 (16%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA    +++ TPDG  +YK +G   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSYVNQYTPDGSLEYKVTGQQTMTDQ-NGKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            IP      +  P  Q I+++     L L+ L   +   +     T+V+ +     + + 
Sbjct: 65  QIPIRSAYQTYSPQNQAIYDQTQQTQLGLAKLANDQTGKISGILGTNVDLSAGNVDKYVN 124

Query: 125 DNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVS 184
           D+                               +     +   +D+  L+  L ++G+  
Sbjct: 125 DH-------------------------------WQSGFNNQWDRDQASLDQSLADKGISM 153

Query: 185 GSVAWNRAIDE---TNRKLHDVRLAAMLKASD 213
           GS A++ A+ +     +   D  L  M   + 
Sbjct: 154 GSAAYDNAMRDFSTRKQAASDQYLGDMYSNAQ 185


>gi|327191473|gb|EGE58493.1| hypothetical protein RHECNPAF_300003 [Rhizobium etli CNPAF512]
          Length = 335

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 35/212 (16%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +    + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTSKSIMKDQ-NGKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            +P Y    +  P  Q I+++     L L+ L   +   +     T+V+ +     +   
Sbjct: 65  ELPVYSAYQTYSPENQAIYDQTQQTQLGLARLANDQTGKISGILGTNVDLSAGNVDKY-- 122

Query: 125 DNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVS 184
                                            +     +   +D+  LE  L ++G+  
Sbjct: 123 -----------------------------VNNHWQSGFDNQWNRDQASLEQSLADKGIAM 153

Query: 185 GSVAWNRAIDE---TNRKLHDVRLAAMLKASD 213
           GS A++ A+ +     +   D  L  M   + 
Sbjct: 154 GSAAYDNAMRDFSTRKQAASDQYLGDMYSNAQ 185


>gi|116253668|ref|YP_769506.1| hypothetical protein RL3928 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258316|emb|CAK09418.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 335

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 35/212 (16%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK SG   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVSGYQTMKDQ-NGKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            +P Y    +  P  Q I+++     L LS L  ++   +     T+V+ +     +   
Sbjct: 65  QLPTYSAYQTYSPQNQAIYDQTQQTQLGLSKLANEQTGKISGILGTNVDLSAGNVDKYAN 124

Query: 125 DNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVS 184
           D+                               +     +   +D+  L+  L ++G+  
Sbjct: 125 DH-------------------------------WQGGFNNQWDRDQASLDQSLADKGISM 153

Query: 185 GSVAWNRAIDE---TNRKLHDVRLAAMLKASD 213
           GS A+N A+ +     +   D  L  M   + 
Sbjct: 154 GSEAYNNALRDFSTRKQAASDQFLGDMYSNAQ 185


>gi|86356745|ref|YP_468637.1| hypothetical protein RHE_CH01103 [Rhizobium etli CFN 42]
 gi|86280847|gb|ABC89910.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 334

 Score = 92.7 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 35/212 (16%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +   APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +G   + D   G+  
Sbjct: 6   KPPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTGYQTMTDQ-NGKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
            +P Y    +  P  Q I+++     L L+ L   +   +     ++V+ +     + + 
Sbjct: 65  KLPTYSAYQTYSPENQAIYDQTQQTQLGLARLANDQTAKVSGILGSNVDLSAGNVDKYVN 124

Query: 125 DNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVS 184
           D+                               +     +   +D+  LE  L ++G+  
Sbjct: 125 DH-------------------------------WQSGFNNQWDRDQASLEQSLADKGIAI 153

Query: 185 GSVAWNRAIDE---TNRKLHDVRLAAMLKASD 213
           GS A++ A+ +     +   D  L  M   + 
Sbjct: 154 GSAAYDNAMRDFTTRKQAASDQYLGDMHSNAQ 185


>gi|218510551|ref|ZP_03508429.1| hypothetical protein RetlB5_25766 [Rhizobium etli Brasil 5]
          Length = 271

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 7/209 (3%)

Query: 5   RASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREI 64
           +A  APDP   A+ Q + N+  A ANA   + ++ TPDG  +YK +G   + D   G+  
Sbjct: 6   KAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVTGKSTMTDQ-NGKTY 64

Query: 65  SIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLR 124
           ++P Y    +L P  Q I+++     L L+ L   + Q +     T+V+ +     + + 
Sbjct: 65  NLPVYSAYQTLSPQNQAIYDQSQQTQLGLAKLANDQTQKVSGILGTNVDLSSGNVDKYVN 124

Query: 125 DNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVS 184
           D+      N    E+  +  +    G      A+ + ++    + +   +  L +     
Sbjct: 125 DHWRAGFDNQWDREQASLDQSLADKGIAMGSAAYDNAMRDFTTRKQAAADQYLGDM---- 180

Query: 185 GSVAWNRAIDETNRKLHDVRLAAMLKASD 213
            S A N  + E N+ L++  ++A++  S 
Sbjct: 181 YSNAQNSILTERNQPLNE--ISALMSGSQ 207


>gi|152982946|ref|YP_001353886.1| hypothetical protein mma_2196 [Janthinobacterium sp. Marseille]
 gi|151283023|gb|ABR91433.1| Hypothetical protein mma_2196 [Janthinobacterium sp. Marseille]
          Length = 305

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 77/213 (36%), Gaps = 41/213 (19%)

Query: 2   GKQRASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIG 61
           G      APD    A      NL  A A A    ++++TP G   Y         D    
Sbjct: 24  GSPSPPPAPDYAGAAQQTAQGNLEAARAAAEANRVNQVTPYGNLTYSRDPNASTPDGG-- 81

Query: 62  REISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQ---DLLPHHHTHVNTTKDF 118
                  +  + +L P QQ + ++QN  +L L+ L  + +      L ++ T  +   D 
Sbjct: 82  -------WTATQTLLPAQQALLDQQNKTSLGLAGLADRGLGYVDQALSNNITAADLPADM 134

Query: 119 PPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLH 178
                                            Q  + A + R Q  ++Q R+ L+ +L 
Sbjct: 135 V-----------------------------NAGQTGQDALMARFQPQMEQSRKALDAQLA 165

Query: 179 NQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKA 211
           NQG+  GS A+N A+    +  +D+R  A L  
Sbjct: 166 NQGITQGSEAYNNAMRTQQQGENDLRSQAALNG 198


>gi|126443127|ref|YP_001063336.1| hypothetical protein BURPS668_A2342 [Burkholderia pseudomallei 668]
 gi|126222618|gb|ABN86123.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
          Length = 408

 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 63/212 (29%), Gaps = 25/212 (11%)

Query: 6   ASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREIS 65
           A  APDP A+A+     N   A  N      +   P G  Q    G D    +       
Sbjct: 36  APAAPDPYAVANATTQTNNQTAQFNKALNLNNYSNPFGSQQSTQIGTDPATGA------- 88

Query: 66  IPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRD 125
            P Y  + +     Q + N         S + +    +     +  +        +    
Sbjct: 89  -PIYNTNITASGPLQSLIN---------STMGSA--GNANSTVNNALFGLGGLTARYDAL 136

Query: 126 NDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSG 185
           N         ++            G      A    L     Q +  LE++L NQGL  G
Sbjct: 137 NGKLGALAGQID--PNAAQLAGQRGQNAAYAAQTQYLDPRFSQGQTSLESQLANQGLTPG 194

Query: 186 SVAWNRAID----ETNRKLHDVRLAAMLKASD 213
           S A++ A+       N+   D    ++L    
Sbjct: 195 SQAYDNAMKNFNLSKNQAYSDAANQSILTGQQ 226


>gi|167907339|ref|ZP_02494544.1| hypothetical protein BpseN_34235 [Burkholderia pseudomallei NCTC
           13177]
          Length = 399

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 63/212 (29%), Gaps = 25/212 (11%)

Query: 6   ASLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREIS 65
           A  APDP A+A+     N   A  N      +   P G  Q    G D    +       
Sbjct: 27  APAAPDPYAVANATTQTNNQTAQFNKALNLNNYSNPFGSQQSTQIGTDPATGA------- 79

Query: 66  IPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRD 125
            P Y  + +     Q + N         S + +    +     +  +        +    
Sbjct: 80  -PIYNTNITASGPLQSLIN---------STMGSA--GNANSTVNNALFGLGGLTARYDAL 127

Query: 126 NDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSG 185
           N         ++            G      A    L     Q +  LE++L NQGL  G
Sbjct: 128 NGKLGALAGQID--PNAAQLAGQRGQNAAYAAQTQYLDPRFSQGQTSLESQLANQGLTPG 185

Query: 186 SVAWNRAID----ETNRKLHDVRLAAMLKASD 213
           S A++ A+       N+   D    ++L    
Sbjct: 186 SQAYDNAMKNFNLSKNQAYSDAANQSILTGQQ 217


>gi|13470675|ref|NP_102244.1| hypothetical protein mll0449 [Mesorhizobium loti MAFF303099]
 gi|14021417|dbj|BAB48030.1| mll0449 [Mesorhizobium loti MAFF303099]
          Length = 230

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 29/52 (55%)

Query: 160 DRLQSSLQQDREDLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKA 211
           +RL   L Q  + L+T+L NQG+  GS A++RA+ +     +D     +L+ 
Sbjct: 22  ERLDPILAQQSDALQTQLSNQGIKLGSAAYDRAMTQQALHANDATDQLILQG 73


>gi|259488782|tpe|CBF88504.1| TPA: auxin efflux transporter family protein (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 584

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 16/177 (9%)

Query: 5   RASLAPDPKAIASLQLSANLANASANA---YRENIDRMTPDGIWQYKTSGVDKIIDSFIG 61
           R  LAP  + I   +   N     A     Y +N +++ PD          D   +   G
Sbjct: 214 RVLLAPKERYIEEGE-RDNGETVVAQGRERYTDNPEQVDPDEPLIRTRDSSDGSTEQATG 272

Query: 62  REIS---------IPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHV 112
                         P   +SYS   +    H  ++  +     L        LP   +  
Sbjct: 273 SNDDSDVFHSGEATPVNTRSYSYTKLPHSGH--EDQAHDQSPILGPPPSGPFLPRQDSRG 330

Query: 113 N-TTKDFPPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQ 168
           +           +DN + + P +  +     L      G  ++  A   RL  SLQ+
Sbjct: 331 DILYFPNVEVNPQDNTLEQGPLSRFKTSMGRLRVRIASGWARWTSALYSRLPPSLQK 387


>gi|67517312|ref|XP_658534.1| hypothetical protein AN0930.2 [Aspergillus nidulans FGSC A4]
 gi|40746803|gb|EAA65959.1| hypothetical protein AN0930.2 [Aspergillus nidulans FGSC A4]
          Length = 644

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 16/177 (9%)

Query: 5   RASLAPDPKAIASLQLSANLANASANA---YRENIDRMTPDGIWQYKTSGVDKIIDSFIG 61
           R  LAP  + I   +   N     A     Y +N +++ PD          D   +   G
Sbjct: 274 RVLLAPKERYIEEGE-RDNGETVVAQGRERYTDNPEQVDPDEPLIRTRDSSDGSTEQATG 332

Query: 62  REIS---------IPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHV 112
                         P   +SYS   +    H  ++  +     L        LP   +  
Sbjct: 333 SNDDSDVFHSGEATPVNTRSYSYTKLPHSGH--EDQAHDQSPILGPPPSGPFLPRQDSRG 390

Query: 113 N-TTKDFPPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQ 168
           +           +DN + + P +  +     L      G  ++  A   RL  SLQ+
Sbjct: 391 DILYFPNVEVNPQDNTLEQGPLSRFKTSMGRLRVRIASGWARWTSALYSRLPPSLQK 447


>gi|15320624|ref|NP_203468.1| hypothetical protein Mx8p54 [Myxococcus phage Mx8]
 gi|15281734|gb|AAK94389.1|AF396866_54 p54 [Myxococcus phage Mx8]
          Length = 333

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 160 DRLQSSLQQDREDLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKA 211
            RL    Q+  +   T+L NQGL  GS A+  A  E  ++ +D   +AM  A
Sbjct: 111 SRLDPQWQRREDAERTRLLNQGLSEGSEAYRNAQSEFGQQRNDAYTSAMASA 162


>gi|75909095|ref|YP_323391.1| hypothetical protein Ava_2885 [Anabaena variabilis ATCC 29413]
 gi|75702820|gb|ABA22496.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 885

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 12/150 (8%)

Query: 76  HPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKPNAS 135
            P+Q  + N+    +  L+   T R    +              P    D   P+  +  
Sbjct: 465 TPVQLDLFNQ----HKNLALFATTRAGKSVLVSGILTQALAHGIPVVALDFPKPDGTSTF 520

Query: 136 LEERKEILYNYPTMGSQQ-----YEKAFLDRLQSSLQQDREDLETKLHNQGLVS---GSV 187
            +    +  N       +     +E+  L  L    Q+DR    T      L++   GS 
Sbjct: 521 TDYAHFMEGNGAYFDISKQSNNLFEQPDLRSLDPEQQRDRLLDYTGFLESALMTMVLGSS 580

Query: 188 AWNRAIDETNRKLHDVRLAAMLKASDEQER 217
             N+ + +T R L ++ L+A       QER
Sbjct: 581 NDNQLLTQTVRSLLNLALSAFFADKGIQER 610


>gi|17227965|ref|NP_484513.1| hypothetical protein all0469 [Nostoc sp. PCC 7120]
 gi|17129814|dbj|BAB72427.1| all0469 [Nostoc sp. PCC 7120]
          Length = 885

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 12/150 (8%)

Query: 76  HPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKPNAS 135
            P+Q  + N+    +  L+   T R    +              P    D   P+  +  
Sbjct: 465 TPVQLDLFNQ----HKNLALFATTRAGKSVLVSGILTQALAHGIPVVALDFPKPDGTSTF 520

Query: 136 LEERKEILYNYPTMGSQQ-----YEKAFLDRLQSSLQQDREDLETKLHNQGLVS---GSV 187
            +    +  N       +     +E+  L  L    Q+DR    T      L++   GS 
Sbjct: 521 TDYAHFMEGNGAYFDISRQSNNLFEQPDLRSLDPEQQRDRLLDYTGFLESALMTMVLGSS 580

Query: 188 AWNRAIDETNRKLHDVRLAAMLKASDEQER 217
             N+ + +T R L ++ L+A       QER
Sbjct: 581 NDNQLLTQTVRSLLNLALSAFFADQGIQER 610


>gi|190347468|gb|EDK39740.2| hypothetical protein PGUG_03838 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 661

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 43/151 (28%), Gaps = 13/151 (8%)

Query: 52  VDKIIDSFIGREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTH 111
            D    S  G+   +  Y  +              N N + + +       D    +H+H
Sbjct: 22  TDDRRSSLGGKSTDLSAYETADEGSEFA-------NDNEIEIKNYNEDETNDYKDQNHSH 74

Query: 112 VNTTKDFPPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAF-----LDRLQSSL 166
            +   D                +  E     + N   +  +  E        L+R+ S  
Sbjct: 75  AS-HSDSTIHNPIHAKSSSSSFSHPEPFDGTIKNGNEIDDEIAEDQLNRQQTLERISSRK 133

Query: 167 QQDREDLETKLHNQGLVSGSVAWNRAIDETN 197
             +    E ++  +G+   S+ W    D  N
Sbjct: 134 SAEEVAREEQMAEEGIEPSSLDWEGPEDPLN 164


>gi|119511821|ref|ZP_01630922.1| hypothetical protein N9414_03748 [Nodularia spumigena CCY9414]
 gi|119463533|gb|EAW44469.1| hypothetical protein N9414_03748 [Nodularia spumigena CCY9414]
          Length = 885

 Score = 41.4 bits (95), Expect = 0.095,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 17/167 (10%)

Query: 76  HPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKPNAS 135
            PI   + N+    +  L+   T R    +              P    D   P+  +  
Sbjct: 465 TPIHLDLFNQ----HKNLALFATTRAGKSVLVSGILTQALAHGIPVVALDFPKPDGSSTF 520

Query: 136 LEERKEILYNYPTMGSQQ-----YEKAFLDRLQSSLQQDREDLETKLHNQGLVS---GSV 187
            +  + +  N       +     +E+  L  L    Q+DR    T      L++   GS 
Sbjct: 521 TDYTEFMEGNGAYFDISKQSNNLFEQPDLRSLSPEEQRDRLLDYTGFLESALMTMVLGSS 580

Query: 188 AWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHNLAQA 234
             N+ + +T R L ++ L+A       QER      K A        
Sbjct: 581 TENQLLSQTVRSLINLALSAFFADVGIQERY-----KQAIAGGFGSQ 622


>gi|294921717|ref|XP_002778707.1| partner of ralbp-1, putative [Perkinsus marinus ATCC 50983]
 gi|239887427|gb|EER10502.1| partner of ralbp-1, putative [Perkinsus marinus ATCC 50983]
          Length = 554

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 57  DSFIGREIS---IPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVN 113
           D+ +GR +S   +P   ++ S  P+QQ++   +   +     L      D   H     +
Sbjct: 230 DATLGRPMSTGVLPQAHETESASPVQQEVKQGKQRPS-----LAGSYKFDGSSHDIGFGS 284

Query: 114 TTKDFPPQQLRDNDVPEKPNASLEERKEILYNYP-TMGSQQYEKAFLDRLQSSLQQDRED 172
             K        D   PE      ++R E+         + +       RL+ SL+  R D
Sbjct: 285 KAKLDTGYDDNDAASPELEQDFRDQRAELARQLARKQDADRMLSEARARLE-SLRSKRRD 343

Query: 173 LETKLHN-----QGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLD 219
           L+ +  +     +G     ++  R +DE  ++++DVR  A+     E E L 
Sbjct: 344 LDKRYTDVSAALEGQQMAVLSTKRQLDEAVKEINDVRQLAI----QEGEPLA 391


>gi|156402881|ref|XP_001639818.1| predicted protein [Nematostella vectensis]
 gi|156226949|gb|EDO47755.1| predicted protein [Nematostella vectensis]
          Length = 1091

 Score = 41.0 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 62/192 (32%), Gaps = 3/192 (1%)

Query: 14  AIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISIPHYLQSY 73
                Q          N  + N ++   +   Q   S V   +D+ +G ++       S 
Sbjct: 576 QTGDFQAQIETVEPIRNNTQNNSEQAENNNNKQ-PQSNVQTNVDASLGLQVQQVVVPLSS 634

Query: 74  SLHPIQQQIHNRQNINNLLLSDLLTQRIQDL-LPHHHTHVNTTKDFPPQQLRDNDVPEKP 132
            ++   Q ++N+ +   +  S +  Q   D   P  +T  N+           N   E  
Sbjct: 635 LVNTGSQMMNNQTSSEQVN-SQVNPQAAGDTKQPQENTRGNSNTQINSPYPSVNMTTEGS 693

Query: 133 NASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGLVSGSVAWNRA 192
             +  +            +  Y   +       + Q      T+++       S +WN +
Sbjct: 694 QYAPGQSNSTYLTESAGNTTSYSNGYQSSAYPLINQTDNMNNTEMNKMINPDNSSSWNSS 753

Query: 193 IDETNRKLHDVR 204
           ID ++++  + R
Sbjct: 754 IDGSSQQKMNAR 765


>gi|118396978|ref|XP_001030825.1| FHA domain protein [Tetrahymena thermophila]
 gi|89285140|gb|EAR83162.1| FHA domain protein [Tetrahymena thermophila SB210]
          Length = 548

 Score = 40.3 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 6/150 (4%)

Query: 73  YSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKP 132
            +     +        N ++LS+L  Q  Q ++       N  K          +     
Sbjct: 139 QTYSQYLKTFQEESKPNQIVLSEL-NQNSQQIMMIDKIKANNYKKM----QSFEETNVSN 193

Query: 133 NASLEERKEILYNYPTMGSQQYEKAFLDRLQSS-LQQDREDLETKLHNQGLVSGSVAWNR 191
             S++           M +   +++F D+ Q +  +QD + L   + N  L S S     
Sbjct: 194 RQSIQNFANEDKYLFEMNTNNVKQSFNDKFQGNAYKQDNQRLRLPVCNSKLDSSSEEDKE 253

Query: 192 AIDETNRKLHDVRLAAMLKASDEQERLDNI 221
            IDE  + +    L      S++Q  L N+
Sbjct: 254 NIDEYTQAVDQQNLEVNNNTSEDQTALKNV 283


>gi|88798529|ref|ZP_01114113.1| GGDEF domain protein [Reinekea sp. MED297]
 gi|88778629|gb|EAR09820.1| GGDEF domain protein [Reinekea sp. MED297]
          Length = 476

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 50  SGVDKIIDSFIGRE---ISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLP 106
           + V+ + D   G+    I     L    L    Q I +  N    LL+DLL+  I + L 
Sbjct: 52  TQVETVYDELEGQTQHSIDTFRALFQQLLDEQGQTILSPLNKETPLLTDLLS--IAEPLA 109

Query: 107 HHHTHVNTTKDFPPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRL--QS 164
            H   ++      P      DV ++     +   E L       +         RL    
Sbjct: 110 RHFRTLSRFDPAEPGSPDLEDVRKRLTVRFKALIETLMLMG--DTSGTLTQLTSRLDENP 167

Query: 165 SLQQ-DREDLET-KLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQ 222
           +    D    +T  L N  L      +   + E N KL   R+  +++A  +   L  ++
Sbjct: 168 NWSMLDELAQKTIHLLNDRLQEEKQQFEGYLSELNAKL--TRIQQIVEA--DSTTLAELK 223

Query: 223 EKHAYFHNLAQAQGLQ 238
           E HA F++   AQ  +
Sbjct: 224 ELHASFNDSINAQMHE 239


>gi|170591765|ref|XP_001900640.1| jmjC domain containing protein [Brugia malayi]
 gi|158591792|gb|EDP30395.1| jmjC domain containing protein [Brugia malayi]
          Length = 1017

 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 18/175 (10%)

Query: 73  YSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKP 132
             + P   + ++ +++N+     L   R ++    H           P  +   D P+ P
Sbjct: 501 QQISPKSSKHNSLRDLNHPS-QKLKATRSRNY---HKPDGPLIVGGIPPAIMPADAPQAP 556

Query: 133 NAS----------LEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLHNQGL 182
           N            L  ++       T    +   +   RLQ  L +D +    K+     
Sbjct: 557 NPYGYDPLASVTPLGHKQLPSAYRRTPDMAKVPPSQKFRLQPQLYKDVKAASEKMETVSE 616

Query: 183 VSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFHNLAQAQGL 237
            +   +W+  +       +D + A     +     +DN       F++   A+  
Sbjct: 617 KTSDKSWSTNVISAPGPSNDSKSAEYESRAATTTHIDN----ERSFYHSESARSY 667


>gi|189191692|ref|XP_001932185.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973791|gb|EDU41290.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 663

 Score = 37.2 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 23/165 (13%)

Query: 7   SLAPDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISI 66
             AP PKA  +   +    N +++    +               G   +  + +G  IS+
Sbjct: 442 PQAPSPKAQVNGDGAQQNTNGTSSGMNNDASMEDNSAANLLDQYGNGSLSGTPVGN-ISL 500

Query: 67  PHYLQSYSLH------------PIQQQIHNRQNIN----------NLLLSDLLTQRIQDL 104
           P   Q  S              P Q    ++Q+ N          ++ +S +     +D 
Sbjct: 501 PRLSQPPSQSHSTTGTPNVPNNPNQTATFDQQDTNLDVGADLLDLDVEMSGMAAAGEKDW 560

Query: 105 LPHHHTHVNTTKDFPPQQLRDNDVPEKPNASLEERKEILYNYPTM 149
           +  +    N  +    QQ   N+     NA +     I  +  +M
Sbjct: 561 VMVNEQSGNAQQPGSGQQPTMNNNQPTTNAGVMPSSNIEADAGSM 605


>gi|118378742|ref|XP_001022545.1| Tubulin-tyrosine ligase family protein [Tetrahymena thermophila]
 gi|89304312|gb|EAS02300.1| Tubulin-tyrosine ligase family protein [Tetrahymena thermophila
           SB210]
          Length = 1245

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 12/172 (6%)

Query: 62  REISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQR-IQDLLPHHHTHVNTTKDFPP 120
           +E+  P      S+H    ++++     +  L+   TQ     +L     H N       
Sbjct: 300 KEMRFPQ-SPINSIHNQHSRLYDYNQGYSQNLNGYTTQEDRNKILKKILAHFNVKVQQME 358

Query: 121 QQLRDN---------DVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDRE 171
           ++   N            +   +      +  YN      QQ      + + S+L ++R+
Sbjct: 359 RKQFMNIFGLEIKQIPPQDISKSHRLNANQAYYNSLNTKRQQKINNLSEMINSNLAENRQ 418

Query: 172 DLETKLHNQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQE 223
           ++  + +N+ + +GS   N+ ++   + L D R A    +SD+Q  L  I E
Sbjct: 419 NVNLR-NNKQMAAGSNKLNQTMNNGQQGLVDKRQAYRSNSSDQQLILSGIAE 469


>gi|145516947|ref|XP_001444362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411773|emb|CAK76965.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1059

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 35/187 (18%)

Query: 14   AIASLQLSANLANASANAYRENIDRMTPDGIW-----QYKTSGVDKIIDSFI------GR 62
             I S QL +N+ + +     +N   +  +              + ++I            
Sbjct: 871  QINSSQLHSNINSYADYQLPQNKQSIPTESSLYINNATQTQDHIKQMIGPISKDSINLNS 930

Query: 63   EISIPHYLQSYSLHPIQQQIHNRQNINN----------LLLSDLLTQ------------R 100
              +   +    S+ P QQQI  + N+            L L++LL               
Sbjct: 931  SYAYDQHYHQQSVDPTQQQIFQQTNLAKHHIRQIQVELLDLTNLLNSVKDQQIKDNVLRE 990

Query: 101  IQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKPNASLEER--KEILYNYPTMGSQQYEKAF 158
            I D L +    +   +     + + N + E+  A L E   K+I+ N      + Y K  
Sbjct: 991  IDDDLNNLQKSIQLIRKQEQPEQQTNRMMEQSQAQLSEEDIKKIVINCSKEMFENYSKVL 1050

Query: 159  LDRLQSS 165
            L++++  
Sbjct: 1051 LEQIKGK 1057


>gi|117924321|ref|YP_864938.1| hypothetical protein Mmc1_1014 [Magnetococcus sp. MC-1]
 gi|117608077|gb|ABK43532.1| hypothetical protein Mmc1_1014 [Magnetococcus sp. MC-1]
          Length = 381

 Score = 36.4 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 69/231 (29%), Gaps = 40/231 (17%)

Query: 1   MGKQRASLAPDPKAIASLQLSANLANASANAY--RENIDRMTPDGIWQYKTSGVDKIIDS 58
           MGK   ++   P  +A+    A     + N         + TP G+  +           
Sbjct: 1   MGKSAPAMPAAPDPVATANAQAAANKEAVNESAKVNQFRQETPYGVLDWS---------- 50

Query: 59  FIGREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTKDF 118
               EI  P      +L    Q+ +  Q      L+ +   R+             + D 
Sbjct: 51  ---GEIGTPDRTMKVTLSEDAQRAYGDQQAIAANLAQIAMGRMG-----QIDAGPFSLDG 102

Query: 119 PPQQLRDNDVPEKPNASLEERKEILYNYPTMGSQQYEKAFLDRLQSSLQQDREDLETKLH 178
             Q            ASLE+ +            Q+       L      ++  L+ +L 
Sbjct: 103 VAQVPN--------GASLEQARNQAMQEYYAHGSQF-------LDKRTANEQSKLQDRLI 147

Query: 179 NQGLVSGSVAWNRAIDETNRKLHDVRLAAMLKASDEQERLDNIQEKHAYFH 229
            QG+   S A+ +A+ +   + H+          + + RL    E    + 
Sbjct: 148 QQGVGLDSRAYRQAMQDFQEQSHEA-----YAELESRARLAGSSEASQQYQ 193


>gi|71022299|ref|XP_761379.1| adenylate cyclase [Ustilago maydis 521]
 gi|1345878|sp|P49606|CYAA_USTMA RecName: Full=Adenylate cyclase; AltName: Full=ATP
           pyrophosphate-lyase; AltName: Full=Adenylyl cyclase
 gi|603940|gb|AAA57469.1| Uac1 [Ustilago maydis]
 gi|46097612|gb|EAK82845.1| CYAA_USTMA Adenylate cyclase (ATP pyrophosphate-lyase) (Adenylyl
           cyclase) [Ustilago maydis 521]
          Length = 2493

 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 26/200 (13%)

Query: 9   APDPKAIASLQLSANLANASANAYRENIDRMTPDGIWQYKTSGVDK---------IIDSF 59
           +P P      +   ++ +   +    +   + P G  +  +              + D  
Sbjct: 499 SPSPSQTPIAERQTSVTSTVESPSHASEASLAPSGSLRTPSRTTASTSTSSASTVLSDRL 558

Query: 60  IGREISIPHYLQSY-SLHPIQ--QQIHNRQNINNLLLSDLLTQRIQDLLPHHHTHVNTTK 116
             +   +P       SL  +Q  Q +    N     L D+   +    +   +   +   
Sbjct: 559 PSQVNMLPRNSVPRLSLAEMQNYQSLRKLSN----NLIDMSQTQNPSAMGASYRRGSIAA 614

Query: 117 DFPPQQLRDNDVPEKPNASLEERKE---ILYNYPTMGSQQYEKAFLDRLQSSLQQDREDL 173
              P       V  + ++ L +RK+     ++  +  S    K     L  S+ Q+R+  
Sbjct: 615 AQAPVDAPQLGVAPRTDSELSDRKDSVVSTHSMRSNHSGISPKTSYANL-PSVIQERQKP 673

Query: 174 ETKLHNQGLVSGSVAWNRAI 193
            T L        +  W  +I
Sbjct: 674 ATAL------PSAANWTSSI 687


>gi|293392510|ref|ZP_06636830.1| primosomal replication protein N prime [Serratia odorifera DSM
           4582]
 gi|291424912|gb|EFE98121.1| primosomal replication protein N prime [Serratia odorifera DSM
           4582]
          Length = 198

 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 37  DRMTPDGIWQYKTSGVDKIIDSFIGREISIPHYLQSYSLHPIQQQIHNRQNINNLLLSDL 96
             +TP G      +  D  + +  G  +         +   +Q  +H+ +N     L++ 
Sbjct: 39  SEVTPRGDTPVSQARFDSALFANHGTRLRDYLAQVQKNFSQLQSAVHDNRNAQVAFLAEK 98

Query: 97  LTQRI---------QDLLPHHHTHVNTTKDFPPQQLRDNDVPEKPNASLEERKEILYNYP 147
           L  +I         Q L   +        D   +     D   +  A +++R+ +L    
Sbjct: 99  LVAQIGALQRELATQTLRRQNQPKAPAQVDLYHKLAEHQDYERRLLAMIQDRESLLGRQT 158

Query: 148 TMGSQQYEKAFLDRLQSSLQQDREDL 173
           T+  QQ  +  L  L+  L + R+ L
Sbjct: 159 TLAGQQKIQQELAALEGRLMRCRQAL 184


>gi|253732074|ref|ZP_04866239.1| possible cell wall associated fibronectin-binding protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253724190|gb|EES92919.1| possible cell wall associated fibronectin-binding protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
          Length = 1136

 Score = 34.9 bits (78), Expect = 8.5,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 76/235 (32%), Gaps = 31/235 (13%)

Query: 21  SANLANASANAYRENIDRMTPDGIWQYKTSGVDKIIDSFIGREISIPHYLQSYSLHPIQQ 80
           + N A   AN+   NI++ T +       +  +  I+     EI       +  +    Q
Sbjct: 197 AKNKAEELANSIINNINKATSNQAVSQVQTAGNHAIEQVHANEIPKAKIDANKDVDKQVQ 256

Query: 81  QIHNRQNINNLLL---SDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDVPEKPNASLE 137
            + +  + N  L       L  RI  +L   H  +N        +     + +      +
Sbjct: 257 ALIDEIDRNPNLTDKEKQALKDRINQILQQGHNDINNALTKEEIEQAKAQLAQALQDIKD 316

Query: 138 ERKEILYNYPTMGSQ----------------QYEKAFLDRLQSSLQQDREDLETKLHNQG 181
             K        +  Q                + ++A  DR+   LQQ   D+   +  + 
Sbjct: 317 LVKAKEDAKQDVDKQVQALIDEIDQNPNLTDKEKQALKDRINQILQQGHNDINNAMTKEA 376

Query: 182 LVSGSVAWNRAID---------ETNRKLHDVRLAAMLKASDEQERLDNIQEKHAY 227
           +        +A+          E  ++  D R+ A++   DE +R  N+ +K   
Sbjct: 377 IEQAKERLAQALQEIKNLVKAKENAKQDVDKRVQALI---DEIDRNPNLTDKEKQ 428


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.293    0.115    0.275 

Lambda     K      H
   0.267   0.0347    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,198,234,823
Number of Sequences: 13984884
Number of extensions: 109262083
Number of successful extensions: 302494
Number of sequences better than 10.0: 478
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 509
Number of HSP's that attempted gapping in prelim test: 300310
Number of HSP's gapped (non-prelim): 1858
length of query: 238
length of database: 4,792,584,752
effective HSP length: 135
effective length of query: 103
effective length of database: 2,904,625,412
effective search space: 299176417436
effective search space used: 299176417436
T: 11
A: 40
X1: 16 ( 6.8 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (20.9 bits)
S2: 78 (34.9 bits)