peg_1074
| GeneID in NCBI database: | Locus tag: | ||
| Protein GI in NCBI database: | not defined in NCBI database | Protein Accession: | |
| Gene range: | -(1139359, 1139868) | Protein Length: | 169aa |
| Gene description: | |||
| COG prediction: | none | ||
| KEGG prediction: | not defined in KEGG | ||
| SEED prediction: | hypothetical protein | ||
| Pathway involved in KEGG: | not defined | ||
| Subsystem involved in SEED: | - none - | ||
| sequence | sequence profile | ||
Prediction of Local Sequence Properties
| Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
| Identity | Alignment graph | Length | Definition | Round | E-value |
| Target | 169 | ||||
| 315122533 | 331 | hypothetical protein CKC_03925 [Candidatus Liberibacter | 1 | 2e-75 | |
| 150397033 | 331 | hypothetical protein Smed_1830 [Sinorhizobium medicae W | 1 | 8e-51 | |
| 227822441 | 331 | putative phage major head protein [Sinorhizobium fredii | 1 | 3e-47 | |
| 148257053 | 320 | putative phage major head protein [Bradyrhizobium sp. B | 1 | 3e-23 | |
| 288817864 | 291 | putative phage major head protein [Hydrogenobacter ther | 1 | 4e-22 | |
| 163783849 | 291 | hypothetical protein HG1285_12862 [Hydrogenivirga sp. 1 | 1 | 8e-20 | |
| 160897389 | 306 | putative phage major head protein [Delftia acidovorans | 1 | 4e-19 | |
| 221199511 | 317 | major head protein [Burkholderia multivorans CGD2M] Len | 1 | 4e-17 | |
| 27476049 | 317 | major head protein [Pseudomonas phage PaP3] Length = 31 | 1 | 2e-16 | |
| 167600435 | 317 | major head protein [Pseudomonas phage LUZ24] Length = 3 | 1 | 8e-16 |
| >gi|315122533|ref|YP_004063022.1| hypothetical protein CKC_03925 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 331 | Back alignment and organism information |
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Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/160 (83%), Positives = 150/160 (93%)
Query: 1 MTIVNNTFITSSSTTNKESLSDVVSRITPEDTPIYSMIKKGTTHSIHPEWVVDDLASPGP 60
MT + NTFI++SS+TNKESLSDVVSRITPEDTPIYSMIKKG+T SIHPEWVVDDL+SPGP
Sbjct: 1 MTEITNTFISTSSSTNKESLSDVVSRITPEDTPIYSMIKKGSTRSIHPEWVVDDLSSPGP 60
Query: 61 NAQLEGDEYSFKTINTPERMGNYTQIMRKSWILSGTQEAVDDVGYILKYKEQKLKKALEI 120
NAQLEGDEYSF++I+TPERMGNYTQIMRKSWILSGTQE++DD G +LKYKEQKLKKALEI
Sbjct: 61 NAQLEGDEYSFESISTPERMGNYTQIMRKSWILSGTQESIDDTGSLLKYKEQKLKKALEI 120
Query: 121 RKDVEFALVSSQGSEKTSPRKMAALSSWIKKNASRGTGGV 160
RKDVEFALVS+Q SEK SPRK+A+LSSWIK N +RGTGG
Sbjct: 121 RKDVEFALVSAQESEKKSPRKLASLSSWIKTNVNRGTGGA 160
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Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|150397033|ref|YP_001327500.1| hypothetical protein Smed_1830 [Sinorhizobium medicae WSM419] Length = 331 | Back alignment and organism information |
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| >gi|227822441|ref|YP_002826413.1| putative phage major head protein [Sinorhizobium fredii NGR234] Length = 331 | Back alignment and organism information |
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| >gi|148257053|ref|YP_001241638.1| putative phage major head protein [Bradyrhizobium sp. BTAi1] Length = 320 | Back alignment and organism information |
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| >gi|288817864|ref|YP_003432211.1| putative phage major head protein [Hydrogenobacter thermophilus TK-6] Length = 291 | Back alignment and organism information |
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| >gi|163783849|ref|ZP_02178828.1| hypothetical protein HG1285_12862 [Hydrogenivirga sp. 128-5-R1-1] Length = 291 | Back alignment and organism information |
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| >gi|160897389|ref|YP_001562971.1| putative phage major head protein [Delftia acidovorans SPH-1] Length = 306 | Back alignment and organism information |
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| >gi|221199511|ref|ZP_03572555.1| major head protein [Burkholderia multivorans CGD2M] Length = 317 | Back alignment and organism information |
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| >gi|27476049|ref|NP_775251.1| major head protein [Pseudomonas phage PaP3] Length = 317 | Back alignment and organism information |
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| >gi|167600435|ref|YP_001671935.1| major head protein [Pseudomonas phage LUZ24] Length = 317 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLAST against CDD database part II
No hit with e-value below 0.005
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
No hit with probability above 90.00
Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
No homologous structure with e-value below 0.005
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 90.00
Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 90.00
Homologous Domains in MMDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against MMDB70 database
No hit with e-value below 0.005
Homologous Domains in MMDB70 Database Detected by HHsearch
Original result of HHsearch against MMDB70 database
No hit with probability higher than 90.00