HHsearch alignment for GI: peg_1079 and conserved domain: pfam03237
>pfam03237 Terminase_6 Terminase-like family. This family represents a group of terminase proteins.
Probab=100.00 E-value=3.7e-34 Score=203.81 Aligned_cols=245 Identities=22% Similarity=0.225 Sum_probs=190.0
Q ss_pred CCCCC--CCHHHHCCCCCCEEEEECC--CCHHHHHHHHHHHCCC--CCEEEEEECCCCCCCHHHHHHCCCCCC------C
Q ss_conf 97433--6965503331358998189--8974998863112475--873999924899987565564036799------7
Q 537021.9.peg.1 1 LKAYE--QGRDKWQSNTVHYVWFDEE--PPEDVYFEGLTRINAT--QGLVTLTLTPLKGRSPIIEHYLSASSS------D 68 (251)
Q Consensus 1 f~~~~--q~~~~~~G~~~~~i~~DE~--~~~~~~~~~~~r~~~~--~g~i~~~~nP~~~~~~~~~~~~~~~~~------~ 68 (251)
T Consensus 78 ~~~~~~~~~~~~~rG~~~~~i~~DE~a~~~~~~~~~~~~~~~~~~~~~~~~~~stp~~~~~~~~~~~~~~~~~~~~~~~~ 157 (380)
T pfam03237 78 FLGLESETTAQGYRGASIAGIYFDEATWLPKFQESELVRRLRATKGKWRKTFFSTPPSPGHWVYDFWTGWLDDKGKRTFI 157 (380)
T ss_pred EEECCCCCCHHHCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEE
T ss_conf 96257766431034854554998304536627899998644104799757999889899851989985540167775202
Q ss_pred EEEEEEEHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCEEECCCEEECCCC-EEECCCCCCCCCCEEEEEECCCCC--C
Q ss_conf 5999977133466889999999870897356433005100101430000120-343156546567435752003774--8
Q 537021.9.peg.1 69 RQVIRMTINETPHYNEQERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEE-DIVINSLDIPEHWVQIGGMDFGWH--H 145 (251)
Q Consensus 69 ~~~~~~t~~DNp~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~g~D~G~~--~ 145 (251)
T Consensus 158 ~~~~~~t~~d~~~~~~~~~e~l~~~~~~~~~~qe~~g~f~~~~g~if~~~~~~~~~~~~~~~p~~~~~~~g~D~~~~~~~ 237 (380)
T pfam03237 158 PADVEVTIEDARALGPEYKEELRALYSDEEFARLLMGEWVDTSGSIFKRFELERCDVDEERPPEHREVIGGVDPAASRGG 237 (380)
T ss_pred EEEEECCHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCEECCCCCEECHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
T ss_conf 20674566871326889999998768999999985886665788571478885464675568888559999867888889
Q ss_pred CCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCC
Q ss_conf 71999999977399899994310259987999999983324870897263001117888888999997897477657777
Q 537021.9.peg.1 146 PFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATF 225 (251)
Q Consensus 146 p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~ 225 (251)
T Consensus 238 D~t~~~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~---i~id~~~~G~~~~~~l~~~~~~~---~~~~ 311 (380)
T pfam03237 238 DYAALVVIAEVDGDKFYVLAREHERGLSPAEQAAIIKKLAERYNVIY---IYIDDTGGGESVAQLLRRELPGA---AFTV 311 (380)
T ss_pred CCEEEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEE---EEEECCCCCCHHHHHHHHHCCCC---CCCE
T ss_conf 96699999965798599999998368899999999999986438759---99837864307999999866446---7110
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCEEC
Q ss_conf 76777589989999998607990789
Q 537021.9.peg.1 226 DDGSNGVEAGISDMLDRMRSGRWKVF 251 (251)
Q Consensus 226 ~kg~~sV~~GI~~l~~~~~~grl~Vf 251 (251)
T Consensus 312 ~~a~~~k~~~~~~v~~l~e~g~v~i~ 337 (380)
T pfam03237 312 RPAPKGKNARVLKVSDLIESGRLKVP 337 (380)
T ss_pred EECCCHHHHHHHHHHHHHHCCCEEEE
T ss_conf 58875199999999999988989994