HHsearch alignment of GI: peg_1079 and MMDB domain: 3c6a_A_

>3c6a_A (A:) Terminase large subunit; terminase nuclease, viral protein; 1.16A {Enterobacteria phage RB49} PDB: 3c6h_A
Probab=97.62  E-value=0.00013  Score=43.94  Aligned_cols=119  Identities=8%  Similarity=-0.071  Sum_probs=76.3

Q ss_pred             CCCCCCCEEEEEECCCC---CCCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCC
Q ss_conf             54656743575200377---487199999997739989999431025998799999998332487089726300111788
Q 537021.9.peg.1  127 LDIPEHWVQIGGMDFGW---HHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRS  203 (251)
Q Consensus       127 ~~~~~~~~~~~g~D~G~---~~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  203 (251)
                      ...++...+++|+|+..   +|.+|++++..+  ++.+|+++-+...+.+....++.+.+......   +....+.+++.
T Consensus        53 ~~~~~~~~~~~~~D~A~g~~~D~ta~~v~~~~--~~~~~~v~~~~~~~~~~~~~~~~i~~l~~~~~---~~~i~vE~~~~  127 (232)
T 3c6a_A           53 EKPKEGRKYVATLDCSEGRGQDYHALQIIDIT--EFPYKQVAVYHSNTTSHFILPDIVFKYLMMYN---ECPVYIELNST  127 (232)
T ss_dssp             SCCCTTCCEEEEEECCCSSSSCCEEEEEEECS--SSSEEEEEEEEESCCCTTTHHHHHHHHHHHTT---SCCEEEBCSHH
T ss_pred             ECCCCCCEEEEEEECCCCCCCCCCEEEEEEEC--CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC---CCEEEEEECCC
T ss_conf             25899984999997478768887889999924--88704899981457688899999999998715---66299996785


Q ss_pred             CCCHHHHHHHCCCEEE-----ECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf             8888999997897477-----6577777677758998999999860799078
Q 537021.9.peg.1  204 GEQLSAQYRRQGMKML-----PECATFDDGSNGVEAGISDMLDRMRSGRWKV  250 (251)
Q Consensus       204 ~~s~~e~~r~~G~~~~-----~~~~~~~kg~~sV~~GI~~l~~~~~~grl~V  250 (251)
                      |..+++.+++......     .........+++.+..|..+..++++|++.+
T Consensus       128 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~K~~ri~~l~~~~e~g~i~i  179 (232)
T 3c6a_A          128 GVSIAKSLAMDLEYDNIICDSFIDLGMKQSKRSKAMGCSALKDLIEKDKLII  179 (232)
T ss_dssp             HHHHHHHHHHTSCCCCBCCSBTTBSSBCCCHHHHHHHHHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEE
T ss_conf             8999999989753773256555566743342009999999999997185498