HHsearch alignment of GI: peg_1079 and MMDB domain: 3cpe_A_384-592
>3cpe_A (A:384-592) Terminase, DNA packaging protein GP17; large terminase, alternative initiation, ATP-binding, DNA- binding, hydrolase, nuclease; HET: DNA; 2.80A {Bacteriophage T4} PDB: 3ezk_A*
Probab=98.13 E-value=2.4e-06 Score=53.19 Aligned_cols=141 Identities=8% Similarity=-0.095 Sum_probs=88.4
Q ss_pred CCCEEECCCEEECCCCEEE----CCCCCCCCCCEEEEEECCCC---CCCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHH
Q ss_conf 5100101430000120343----15654656743575200377---4871999999977399899994310259987999
Q 537021.9.peg.1 105 GEPILGSGRIFPIVEEDIV----INSLDIPEHWVQIGGMDFGW---HHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFH 177 (251)
Q Consensus 105 G~~~~~~g~v~~~~~~~~~----~~~~~~~~~~~~~~g~D~G~---~~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~ 177 (251)
++|...++.+++..+.... .....+++...++.|+|+.. +|.++++++.. .++.+|++..+...+.+....
T Consensus 4 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~A~g~~~D~ta~~v~~~--~~~~~~~~~~~~~~~~~~~~~ 81 (209)
T 3cpe_A 4 TLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKYIATLDCSEGRGQDYHALHIIDV--TDDVWEQVGVLHSNTISHLIL 81 (209)
T ss_dssp BSSCHHHHTTCCCCCCCCCSSSEEESSCCCTTCCEEEEEECCSSBTTBCEEEEEEEC--SSSSEEEEEEEEESSSCTTTH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECC--CCCCEEEEEEEECCCCCHHHH
T ss_conf 056678887400222103478814556257888058885225557787426999325--787608999985588886889
Q ss_pred HHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEE--E---ECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf 99998332487089726300111788888899999789747--7---6577777677758998999999860799078
Q 537021.9.peg.1 178 VAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKM--L---PECATFDDGSNGVEAGISDMLDRMRSGRWKV 250 (251)
Q Consensus 178 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~--~---~~~~~~~kg~~sV~~GI~~l~~~~~~grl~V 250 (251)
++.|.+.....+ +....+.+++.|..+++.+++.+... . .........+++.+..|..|..++++|++++
T Consensus 82 ~~~i~~~~~~~~---~~~i~iE~~~~G~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~K~~ri~~l~~~~e~g~i~~ 156 (209)
T 3cpe_A 82 PDIVMRYLVEYN---ECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLII 156 (209)
T ss_dssp HHHHHHHHHHTT---SCCEEEEESHHHHHHHHHHHTTSCCSCEECSSSSCSSEECCHHHHHHHHHHHHHHHHTTSEEC
T ss_pred HHHHHHHHHHCC---CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 999999999728---838999989859999999988745576046666777873785629999999999997498798