Query 537021.9.peg.1079_1 Match_columns 251 No_of_seqs 131 out of 760 Neff 9.0 Searched_HMMs 23785 Date Wed May 25 05:28:20 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1079.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 2wbn_A G2P, terminase large su 99.8 1.7E-19 7.2E-24 123.4 7.3 130 104-242 17-150 (212) 2 3cpe_A Terminase, DNA packagin 99.6 1.4E-14 5.7E-19 96.9 14.6 240 5-250 263-539 (592) 3 2o0j_A Terminase, DNA packagin 98.9 9.5E-09 4E-13 65.4 9.9 104 5-109 263-383 (385) 4 3c6a_A Terminase large subunit 94.1 0.064 2.7E-06 28.5 4.8 115 129-250 55-179 (232) 5 3b85_A Phosphate starvation-in 89.8 0.83 3.5E-05 22.5 7.1 40 159-200 123-162 (208) 6 1rif_A DAR protein, DNA helica 41.1 16 0.00067 15.5 4.3 10 161-170 228-237 (282) 7 3dmq_A RNA polymerase-associat 38.0 18 0.00076 15.3 2.9 46 8-53 266-319 (968) 8 1vdm_A Purine phosphoribosyltr 22.7 26 0.0011 14.4 1.3 32 156-187 81-112 (153) 9 2x78_A Integrase; viral protei 19.7 40 0.0017 13.4 7.4 101 136-244 15-123 (200) 10 3ege_A Putative methyltransfer 18.0 44 0.0018 13.2 5.4 18 230-247 217-234 (261) No 1 >2wbn_A G2P, terminase large subunit; large terminase, nuclease, viral protein, DNA packaging; 1.90A {Bacillus phage SPP1} PDB: 2wc9_A Probab=99.79 E-value=1.7e-19 Score=123.44 Aligned_cols=130 Identities=17% Similarity=0.235 Sum_probs=100.0 Q ss_pred CCCCE-EECCCEEE-CCC-CEEECCCCCCCCCCEEEEEECCCCC-CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHH Q ss_conf 05100-10143000-012-0343156546567435752003774-87199999997739989999431025998799999 Q 537021.9.peg.1 104 KGEPI-LGSGRIFP-IVE-EDIVINSLDIPEHWVQIGGMDFGWH-HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVA 179 (251) Q Consensus 104 ~G~~~-~~~g~v~~-~~~-~~~~~~~~~~~~~~~~~~g~D~G~~-~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~ 179 (251) .|.|. +++|+|+. .+. +...+.+.++.....+++|+||||+ +|+|+++++++++++.+||++|+|..+++++++++ T Consensus 17 ~g~~v~~g~g~v~fd~~~~~~~~i~d~ei~~~~~~~~GiDfG~~~dpta~v~~~~d~~~~~~yi~~E~y~~~~t~~~~a~ 96 (212) T 2wbn_A 17 RGSHMALGSGVVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAFVRWHYDKRKNRIYAIDELVDHKVSLKRTAD 96 (212) T ss_dssp ----------CCSCTTEEECTTCSCHHHHHHCCCEEEEEECCBTTBCEEEEEEEEETTTTEEEEEEEEEESSCCHHHHHH T ss_pred CCCEEEECCCEEECCCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEHEECCCCHHHHHH T ss_conf 78768852543633774787168896784056726997854999888589999998989999998721005899999999 Q ss_pred HHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHH Q ss_conf 998332487089726300111788888899999789747765777776777589989999998 Q 537021.9.peg.1 180 ALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDMLDR 242 (251) Q Consensus 180 ~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~~kg~~sV~~GI~~l~~~ 242 (251) .|+++...... ...+++.+.++.++++++|++..++ .+|++++|++||+.|++. T Consensus 97 ~i~~~~~~~~~------~~~~~a~~~~~~~~~~~~G~~~~~~---~~k~~~sv~~gi~~l~~~ 150 (212) T 2wbn_A 97 FVRKNKYESAR------IIADSSEPRSIDALKLEHGINRIEG---AKKGPDSVEHGERWLDEL 150 (212) T ss_dssp HHHHTTCTTSC------EEECTTCHHHHHHHHHTTCCTTEEE---CCSCGGGHHHHHHHHHTS T ss_pred HHHHHCCCCCE------EEECCCCHHHHHHHHHHCCCCEEEC---CCCCCCHHHHHHHHHHCC T ss_conf 99974788875------9987888889999999789977754---667830599999999728 No 2 >3cpe_A Terminase, DNA packaging protein GP17; large terminase, alternative initiation, ATP-binding, DNA- binding, hydrolase, nuclease; HET: DNA; 2.80A {Bacteriophage T4} PDB: 3ezk_A* Probab=99.63 E-value=1.4e-14 Score=96.94 Aligned_cols=240 Identities=11% Similarity=0.059 Sum_probs=151.0 Q ss_pred CCCHHHHCCCCCCEEEEECCC---C-HHHHHHHHHHHCC-CCCEEEEEECCCCCCCHHHHHHCCC--CCCCEEEEEEEHH Q ss_conf 369655033313589981898---9-7499886311247-5873999924899987565564036--7997599997713 Q 537021.9.peg.1 5 EQGRDKWQSNTVHYVWFDEEP---P-EDVYFEGLTRINA-TQGLVTLTLTPLKGRSPIIEHYLSA--SSSDRQVIRMTIN 77 (251) Q Consensus 5 ~q~~~~~~G~~~~~i~~DE~~---~-~~~~~~~~~r~~~-~~g~i~~~~nP~~~~~~~~~~~~~~--~~~~~~~~~~t~~ 77 (251) ..++++.||.+++.+++||+. . .+.|..+.+.++. +.+++++++||.+ .++++..|... ...+...+...|. T Consensus 263 a~~~da~RG~s~~~l~lDE~Afi~~~~e~~~~~~~~l~~g~~~kiii~STpnG-~n~fy~~~~~a~~g~~~~~~~~~~w~ 341 (592) T 3cpe_A 263 ASSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNG-LNHFYDIWTAAVEGKSGFEPYTAIWN 341 (592) T ss_dssp ECCHHHHHHSCCSEEEEETGGGCTTHHHHHHHHHHHHSSSSCCEEEEEECCCT-TSHHHHHHHHHHTTCSSCEEEEECGG T ss_pred CCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCCC-CCCCHHHHHHHHHCCCCCCCEECCCC T ss_conf 47886666776663275313204068888753023343688736999779988-76327899887407776674123434 Q ss_pred HCCC--------CCH--HHHHHHHHCCCHHHHHHHHCCCCEEECCCEEECCCCEEEC-----------CC-CCCCCCCEE Q ss_conf 3466--------889--9999998708973564330051001014300001203431-----------56-546567435 Q 537021.9.peg.1 78 ETPH--------YNE--QERKRIIDSYPLHEREARTKGEPILGSGRIFPIVEEDIVI-----------NS-LDIPEHWVQ 135 (251) Q Consensus 78 DNp~--------l~~--~~~~~~~~~~~~~~~~~~~~G~~~~~~g~v~~~~~~~~~~-----------~~-~~~~~~~~~ 135 (251) +.|- .++ .+.++.+...+...++++++++|...++.++....-.... .. ..+.+...+ T Consensus 342 ~~per~~~d~~~~~~~~~w~~e~i~~~s~~~F~QEy~~eF~~s~~~vf~~~~l~~~~~~~~~~~~~~~~iye~p~~~~~Y 421 (592) T 3cpe_A 342 SVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEGTSGTLISGMKLAVMDFIEVTPDDHGFHQFKKPEPDRKY 421 (592) T ss_dssp GSGGGGBCTTSBBCTTHHHHHHHHTTSCHHHHHHHHSCCCTTSCSBSSCHHHHTTCCCCCCCCCSSSEEESSCCCTTCCE T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCE T ss_conf 57763355421000437999998745775553014343323454305677898762022220347781332446766602 Q ss_pred EEEECCCC--C-CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHH Q ss_conf 75200377--4-87199999997739989999431025998799999998332487089726300111788888899999 Q 537021.9.peg.1 136 IGGMDFGW--H-HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYR 212 (251) Q Consensus 136 ~~g~D~G~--~-~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r 212 (251) ++|+|.+. . |.+++.++ +.......++.+++..+.+...+++.|.+.+...... -..+..++.|..+++.|+ T Consensus 422 vigvDvA~G~~~DySai~Vi--dv~~~~~eqVa~~~~n~i~~~~~a~~I~~l~~~YN~a---~V~VE~N~~G~~Vi~~L~ 496 (592) T 3cpe_A 422 IATLDCSEGRGQDYHALHII--DVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNEC---PVYIELNSTGVSVAKSLY 496 (592) T ss_dssp EEEEECCSSBTTBCEEEEEE--ECSSSSEEEEEEEEESSSCTTTHHHHHHHHHHHTTSC---CEEEEESHHHHHHHHHHH T ss_pred EEEEECCCCCCCCCEEEEEE--CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCC---EEEEEECCCHHHHHHHHH T ss_conf 68851244577773279994--1478761899998358889899999999999972884---899997984999999998 Q ss_pred -HCCCEEEECCCCCC----CCCCCHHHHHHHHHHHHCCCCCEE Q ss_conf -78974776577777----677758998999999860799078 Q 537021.9.peg.1 213 -RQGMKMLPECATFD----DGSNGVEAGISDMLDRMRSGRWKV 250 (251) Q Consensus 213 -~~G~~~~~~~~~~~----kg~~sV~~GI~~l~~~~~~grl~V 250 (251) +.+..-........ ..+.+...+|..|+.+|++|++.| T Consensus 497 ~dl~y~nl~~~~~~~~Gf~tT~ksK~~~is~Lk~liE~~~i~i 539 (592) T 3cpe_A 497 MDLEYEGVICDSYTDLGMKQTKRTKAVGCSTLKDLIEKDKLII 539 (592) T ss_dssp TTSCCSCEECSSSSCSSEECCHHHHHHHHHHHHHHHHTTSEEC T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE T ss_conf 8745575146776777875784559999999999997498698 No 3 >2o0j_A Terminase, DNA packaging protein GP17; nucleotide-binding fold, hydrolase; HET: DNA ADP; 1.80A {Enterobacteria phage T4} PDB: 2o0h_A* 2o0k_A* Probab=98.91 E-value=9.5e-09 Score=65.39 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=76.8 Q ss_pred CCCHHHHCCCCCCEEEEECCC---C-HHHHHHHHHHH-CCCCCEEEEEECCCCCCCHHHHHHCCC--CCCCEEEEEEEHH Q ss_conf 369655033313589981898---9-74998863112-475873999924899987565564036--7997599997713 Q 537021.9.peg.1 5 EQGRDKWQSNTVHYVWFDEEP---P-EDVYFEGLTRI-NATQGLVTLTLTPLKGRSPIIEHYLSA--SSSDRQVIRMTIN 77 (251) Q Consensus 5 ~q~~~~~~G~~~~~i~~DE~~---~-~~~~~~~~~r~-~~~~g~i~~~~nP~~~~~~~~~~~~~~--~~~~~~~~~~t~~ 77 (251) ..+.++.||.+.+.+++||+. . .++|..+++++ .+.+|++++++||.+ .+|+|+.|... ...++..+...|. T Consensus 263 a~s~da~RG~~~~~lilDE~Afi~~~~e~~~~~~~~~~s~~~GkiIiiSTPNG-~N~FYdl~~~A~~g~n~f~~~~~~W~ 341 (385) T 2o0j_A 263 ASSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNG-LNHFYDIWTAAVEGKSGFEPYTAIWN 341 (385) T ss_dssp ECSHHHHHTSCCSEEEEESGGGSTTHHHHHHHHHHHHHSTTCCEEEEEECCCS-SSHHHHHHHHHHTTCSSCEEEEECGG T ss_pred CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC-CCHHHHHHHHHHHCCCCCEEEEECCE T ss_conf 34556545420254203265410026888875313422489803999989998-70499999998708888637861401 Q ss_pred HCC-------CCCHH---HHHHHHHCCCHHHHHHHHCCCCEE Q ss_conf 346-------68899---999998708973564330051001 Q 537021.9.peg.1 78 ETP-------HYNEQ---ERKRIIDSYPLHEREARTKGEPIL 109 (251) Q Consensus 78 DNp-------~l~~~---~~~~~~~~~~~~~~~~~~~G~~~~ 109 (251) +.| .++++ +.++.+..+++..++|+++++|.. T Consensus 342 ~~p~r~~~~~~~~dee~~~~~~~~~~~s~~~F~QEYeceFlg 383 (385) T 2o0j_A 342 SVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFEG 383 (385) T ss_dssp GSGGGGBCTTSBBCTTHHHHHHHHHTSCHHHHHHHHSCCCSS T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCEECC T ss_conf 055520468889807999999987559999999984986078 No 4 >3c6a_A Terminase large subunit; terminase nuclease, viral protein; 1.16A {Enterobacteria phage RB49} PDB: 3c6h_A Probab=94.09 E-value=0.064 Score=28.50 Aligned_cols=115 Identities=9% Similarity=0.029 Sum_probs=68.0 Q ss_pred CCCCCEEEEEECC--CCC-CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCC--EEEECCCCCEECCCC Q ss_conf 6567435752003--774-87199999997739989999431025998799999998332487--089726300111788 Q 537021.9.peg.1 129 IPEHWVQIGGMDF--GWH-HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWL--PWAWPHDGLQHDKRS 203 (251) Q Consensus 129 ~~~~~~~~~g~D~--G~~-~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~ 203 (251) +.+...+++|+|. |.. |.+|+.++ |-.......+.+|+....++..+++.|.+.+... ..+ .+..++. T Consensus 55 P~~g~~YvigvD~A~G~g~DyS~i~V~--Dvt~~~~~qVA~~r~n~i~p~~~a~ii~~i~~~Yn~a~v-----~vE~Nn~ 127 (232) T 3c6a_A 55 PKEGRKYVATLDCSEGRGQDYHALQII--DITEFPYKQVAVYHSNTTSHFILPDIVFKYLMMYNECPV-----YIELNST 127 (232) T ss_dssp CCTTCCEEEEEECCCSSSSCCEEEEEE--ECSSSSEEEEEEEEESCCCTTTHHHHHHHHHHHTTSCCE-----EEBCSHH T ss_pred CCCCCEEEEEEECCCCCCCCCCEEEEE--ECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE-----EEEECCC T ss_conf 899984999997478768887879999--767987148999740366878999999999987055739-----9997786 Q ss_pred CCCHHHHHH-HCCCE-EEEC---CCCCCCCCCCHHHHHHHHHHHHCCCCCEE Q ss_conf 888899999-78974-7765---77777677758998999999860799078 Q 537021.9.peg.1 204 GEQLSAQYR-RQGMK-MLPE---CATFDDGSNGVEAGISDMLDRMRSGRWKV 250 (251) Q Consensus 204 ~~s~~e~~r-~~G~~-~~~~---~~~~~kg~~sV~~GI~~l~~~~~~grl~V 250 (251) |..+++.++ +.+.. +... .......+.+...+|..++.++++++++| T Consensus 128 G~~v~~~l~~~~~Y~Nl~~~~~~~~Gf~TT~~sK~~~~~~Lk~lie~~~l~i 179 (232) T 3c6a_A 128 GVSIAKSLAMDLEYDNIICDSFIDLGMKQSKRSKAMGCSALKDLIEKDKLII 179 (232) T ss_dssp HHHHHHHHHHTSCCCCBCCSBTTBSSBCCCHHHHHHHHHHHHHHHHTTCEEC T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEE T ss_conf 7999999988744773024244566744342019999999999997185498 No 5 >3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, structural genomics, PSI-2; 2.35A {Corynebacterium glutamicum atcc 13032} Probab=89.80 E-value=0.83 Score=22.49 Aligned_cols=40 Identities=20% Similarity=0.096 Sum_probs=27.5 Q ss_pred CEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEC Q ss_conf 989999431025998799999998332487089726300111 Q 537021.9.peg.1 159 DVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHD 200 (251) Q Consensus 159 ~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~ 200 (251) +.+.|+||. .+.+..++...+.+.+..-.++..-|....| T Consensus 123 n~~vIvDEa--QN~t~~~~~~ilTRig~~sKli~~GD~~Q~d 162 (208) T 3b85_A 123 DAFVILDEA--QNTTPAQMKMFLTRLGFGSKMVVTGDITQVD 162 (208) T ss_dssp SEEEEECSG--GGCCHHHHHHHHTTBCTTCEEEEEEC----- T ss_pred CCEEEECHH--HCCCHHHHHHHHHHCCCCCEEEEECCHHHCC T ss_conf 067773156--4699999999998717885699927877616 No 6 >1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23 Probab=41.09 E-value=16 Score=15.53 Aligned_cols=10 Identities=0% Similarity=0.039 Sum_probs=5.7 Q ss_pred EEEEEEHHHC Q ss_conf 9999431025 Q 537021.9.peg.1 161 IYVVKNYRCR 170 (251) Q Consensus 161 ~~i~de~~~~ 170 (251) +.|+||.... T Consensus 228 ~VIiDEaH~~ 237 (282) T 1rif_A 228 MMMNDECHLA 237 (282) T ss_dssp EEEEETGGGC T ss_pred EEEEECCCCC T ss_conf 9999289677 No 7 >3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription factor, RNA polymerase recycling, activator, ATP-binding, DNA-binding; 3.20A {Escherichia coli K12} Probab=37.99 E-value=18 Score=15.26 Aligned_cols=46 Identities=15% Similarity=0.196 Sum_probs=28.4 Q ss_pred HHHHCCCCCCEEEEECCCCH-------HHHHHHHHHH-CCCCCEEEEEECCCCC Q ss_conf 65503331358998189897-------4998863112-4758739999248999 Q 537021.9.peg.1 8 RDKWQSNTVHYVWFDEEPPE-------DVYFEGLTRI-NATQGLVTLTLTPLKG 53 (251) Q Consensus 8 ~~~~~G~~~~~i~~DE~~~~-------~~~~~~~~r~-~~~~g~i~~~~nP~~~ 53 (251) .+.+....+|.+++||+... +...+.+..+ ....+.+.+|.||... T Consensus 266 ~~~l~~~~~dlvIvDEAH~l~n~~~~~s~~~~~~~~l~~~~~~~llLTaTP~~n 319 (968) T 3dmq_A 266 LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 (968) T ss_dssp THHHHTSCCCEEEECCSSCCCCBTTBCCHHHHHHHHHHTTCSSEEESCSSCSSS T ss_pred HHHHHCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC T ss_conf 988735798889983666531666488899999998753046289841425778 No 8 >1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Probab=22.72 E-value=26 Score=14.41 Aligned_cols=32 Identities=13% Similarity=0.110 Sum_probs=27.4 Q ss_pred CCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCC Q ss_conf 73998999943102599879999999833248 Q 537021.9.peg.1 156 RDSDVIYVVKNYRCREQTPIFHVAALKSWGKW 187 (251) Q Consensus 156 ~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~ 187 (251) ..++.+.|+|....+|.|....++.+++.+.. T Consensus 81 ~~gk~VLiVDDv~~TG~Tl~~~~~~l~~~ga~ 112 (153) T 1vdm_A 81 LKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAK 112 (153) T ss_dssp CBTCEEEEEEEEESSCHHHHHHHHHHHTTTBS T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC T ss_conf 58998999725315684799999999865997 No 9 >2x78_A Integrase; viral protein, DNA-directed DNA polyme nucleotidyltransferase, DNA integration, aspartyl protease, recombination, transferase; 2.00A {Human spumaretrovirus} PDB: 2x6n_A 2x6s_A 2x74_A 3dlr_A Probab=19.73 E-value=40 Score=13.41 Aligned_cols=101 Identities=12% Similarity=0.133 Sum_probs=52.2 Q ss_pred EEEECC-CC---CCCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCC-CCEEEECCCCCEECCCC---CCCH Q ss_conf 752003-77---4871999999977399899994310259987999999983324-87089726300111788---8888 Q 537021.9.peg.1 136 IGGMDF-GW---HHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGK-WLPWAWPHDGLQHDKRS---GEQL 207 (251) Q Consensus 136 ~~g~D~-G~---~~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~---~~s~ 207 (251) .+++|+ |- +.....++.++|.-.+.+.++ -....+....+..++.... ..+ ..+..|.+. +..+ T Consensus 15 ~~~iD~~gp~~~~~g~~y~l~~vD~~Sr~~~~~---~l~~~~~~~~~~~l~~~~~~g~P-----~~i~sD~G~~F~s~~~ 86 (200) T 2x78_A 15 KFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLY---PTKAPSTSATVKSLNVLTSIAIP-----RVIHSDQGAAFTSSTF 86 (200) T ss_dssp EEEEEEECCCSCBTTBCEEEEEEETTTCCEEEE---EESSSCHHHHHHHHHHHTTTCCC-----SEEEECSCHHHHSHHH T ss_pred EEEEEEEEECCCCCCEEEEEEEEECCCCEEEEE---EEECCCHHHHHHHHHHHHHCCCC-----EEEECCCCCCEEEEEE T ss_conf 999998550226799189999998999729999---93255389999888898730887-----4974477663675420 Q ss_pred HHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHC Q ss_conf 9999978974776577777677758998999999860 Q 537021.9.peg.1 208 SAQYRRQGMKMLPECATFDDGSNGVEAGISDMLDRMR 244 (251) Q Consensus 208 ~e~~r~~G~~~~~~~~~~~kg~~sV~~GI~~l~~~~~ 244 (251) .+.++..|+............++.+|.-++.|...++ T Consensus 87 ~~~~~~~gi~~~~~~~~~p~~ng~~ER~~~~lk~~lr 123 (200) T 2x78_A 87 AEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLT 123 (200) T ss_dssp HHHHHHHTCEEEECC-------CHHHHHHHHHHHHHH T ss_pred CCCHHCCCEEEECCCCCCCCCCCEEECHHHHHHHHHH T ss_conf 0100027867512579988778808837999999999 No 10 >3ege_A Putative methyltransferase from antibiotic biosynthesis pathway; YP_324569.1, structural genomics; 2.40A {Anabaena variabilis atcc 29413} Probab=17.96 E-value=44 Score=13.18 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=10.9 Q ss_pred CCHHHHHHHHHHHHCCCC Q ss_conf 758998999999860799 Q 537021.9.peg.1 230 NGVEAGISDMLDRMRSGR 247 (251) Q Consensus 230 ~sV~~GI~~l~~~~~~gr 247 (251) ..+..|.+.++.-+++|. T Consensus 217 ~~~~~~l~~l~~dL~~g~ 234 (261) T 3ege_A 217 DLVEKGLELLTADLNNGE 234 (261) T ss_dssp HHHHHHHHHHHHHHHTTH T ss_pred HHHHHHHHHHHHHHHCCC T ss_conf 999999999998754885 Done!