Query 537021.9.peg.1087_1
Match_columns 48
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 39220
Date Wed May 25 06:08:36 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1087.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 pfam12303 SNDH Membrane bound 30.9 23 0.00059 17.8 1.1 15 24-38 61-75 (140)
2 pfam03258 Baculo_FP Baculoviru 24.2 33 0.00084 17.1 0.9 26 18-43 142-167 (214)
3 TIGR02274 dCTP_deam deoxycytid 17.9 1E+02 0.0026 14.8 3.1 23 22-44 86-116 (198)
4 pfam06090 Ins_P5_2-kin Inosito 13.8 62 0.0016 15.8 0.4 15 23-37 121-135 (301)
5 pfam07717 DUF1605 Domain of un 11.1 1.6E+02 0.004 13.9 1.8 14 2-15 59-72 (110)
6 KOG2550 consensus 10.5 89 0.0023 15.1 0.4 30 10-39 21-50 (503)
7 KOG1551 consensus 9.0 2E+02 0.0052 13.4 1.8 26 13-47 95-120 (371)
8 pfam07349 DUF1478 Protein of u 6.8 99 0.0025 14.9 -0.7 21 25-45 25-45 (162)
9 PRK02946 aceK bifunctional iso 5.6 2.2E+02 0.0057 13.2 0.6 29 14-46 404-432 (580)
10 pfam04885 Stig1 Stigma-specifi 5.5 3.1E+02 0.008 12.5 1.6 43 4-46 7-49 (136)
No 1
>pfam12303 SNDH Membrane bound L-sorbosone dehydrogenase. This domain family is found in bacteria, and is approximately 140 amino acids in length. There are two conserved sequence motifs: LPNGD and LLRD. SNDH converts L-sorbosone to 2-keto-L-gulonic acid.
Probab=30.90 E-value=23 Score=17.84 Aligned_cols=15 Identities=40% Similarity=0.820 Sum_probs=12.7
Q ss_pred EEECCEEEEECCCCC
Q ss_conf 665323899867551
Q 537021.9.peg.1 24 FLIHPKWILLSPNNV 38 (48)
Q Consensus 24 flihpkwillspnnv 38 (48)
=|-||.|++.-||.-
T Consensus 61 gL~hPRwlyvLPNGD 75 (140)
T pfam12303 61 GLDHPRWLYVLPNGD 75 (140)
T ss_pred CCCCCCEEEECCCCC
T ss_conf 478973478778898
No 2
>pfam03258 Baculo_FP Baculovirus FP protein. The FP protein is missing in baculovirus (Few Polyhedra) mutants.
Probab=24.22 E-value=33 Score=17.13 Aligned_cols=26 Identities=38% Similarity=0.539 Sum_probs=22.6
Q ss_pred CCCCCEEEECCEEEEECCCCCEEEEE
Q ss_conf 10021566532389986755110033
Q 537021.9.peg.1 18 ETARNAFLIHPKWILLSPNNVMAPLN 43 (48)
Q Consensus 18 etarnaflihpkwillspnnvmapln 43 (48)
..+|+|.|-|-|+|-+.-+.||+--+
T Consensus 142 kk~RdaLLp~yKYislcK~GVMvR~~ 167 (214)
T pfam03258 142 KKTRDALLPHYKYVSLCKNGVMVRRN 167 (214)
T ss_pred HHHHHHHCCCCEEEEEECCCEEEEEC
T ss_conf 99887417645278870473688606
No 3
>TIGR02274 dCTP_deam deoxycytidine triphosphate deaminase; InterPro: IPR011962 Members of this family include the Escherichia coli monofunctional deoxycytidine triphosphate deaminase (dCTP deaminase) and a Methanocaldococcus jannaschii bifunctional dCTP deaminase (3.5.4.13 from EC)/dUTP diphosphatase (3.6.1.23 from EC). For additional information please see .; GO: 0008829 dCTP deaminase activity, 0006229 dUTP biosynthetic process.
Probab=17.89 E-value=1e+02 Score=14.78 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=16.2
Q ss_pred CEEEECCEEEEE--------CCCCCEEEEEE
Q ss_conf 156653238998--------67551100335
Q 537021.9.peg.1 22 NAFLIHPKWILL--------SPNNVMAPLNL 44 (48)
Q Consensus 22 naflihpkwill--------spnnvmaplnl 44 (48)
.+|.|||.-..| -||+|||-++.
T Consensus 86 ~~f~i~P~~f~La~T~E~v~lP~dvva~~~G 116 (198)
T TIGR02274 86 EEFVIPPGEFVLATTLEYVKLPDDVVAFVEG 116 (198)
T ss_pred CEEEECCCCEEEEEEEEEEEECCCEEEEEEC
T ss_conf 8799699876888889999508850788862
No 4
>pfam06090 Ins_P5_2-kin Inositol-pentakisphosphate 2-kinase. This is a family of inositol-pentakisphosphate 2-kinases (EC 2.7.1.158) (also known as inositol 1,3,4,5,6-pentakisphosphate 2-kinase, Ins(1,3,4,5,6)P5 2-kinase) and InsP5 2-kinase). This enzyme phosphorylates Ins(1,3,4,5,6)P5 to form Ins(1,2,3,4,5,6)P6 (also known as InsP6 or phytate). InsP6 is involved in many processes such as mRNA export, nonhomologous end-joining, endocytosis and ion channel regulation.
Probab=13.75 E-value=62 Score=15.83 Aligned_cols=15 Identities=47% Similarity=1.037 Sum_probs=11.9
Q ss_pred EEEECCEEEEECCCC
Q ss_conf 566532389986755
Q 537021.9.peg.1 23 AFLIHPKWILLSPNN 37 (48)
Q Consensus 23 aflihpkwillspnn 37 (48)
..-|.|||..+||+.
T Consensus 121 ~vEiKPKwl~~s~s~ 135 (301)
T pfam06090 121 TVEIKPKWLFLSPSA 135 (301)
T ss_pred EEEECCCCCCCCCCC
T ss_conf 786054400557776
No 5
>pfam07717 DUF1605 Domain of unknown function (DUF1605). This family is found towards the C-terminus of the DEAD-box helicases (pfam00270). In these helicases it apparently always found in association with pfam04408. There do seem to be a couple of instances where it occurs by itself.
Probab=11.08 E-value=1.6e+02 Score=13.89 Aligned_cols=14 Identities=29% Similarity=0.596 Sum_probs=10.4
Q ss_pred CEEEEECCCCEEEC
Q ss_conf 60688735302313
Q 537021.9.peg.1 2 KTKVMVHPNRVMAS 15 (48)
Q Consensus 2 ktkvmvhpnrvmas 15 (48)
+.+|.+||.-++..
T Consensus 59 ~~~v~iHPsS~l~~ 72 (110)
T pfam07717 59 GQPVFIHPSSVLFG 72 (110)
T ss_pred CCEEEECCCCCCCC
T ss_conf 97899815620147
No 6
>KOG2550 consensus
Probab=10.51 E-value=89 Score=15.07 Aligned_cols=30 Identities=27% Similarity=0.428 Sum_probs=24.3
Q ss_pred CCEEECCCCCCCCEEEECCEEEEECCCCCE
Q ss_conf 302313531002156653238998675511
Q 537021.9.peg.1 10 NRVMASNAETARNAFLIHPKWILLSPNNVM 39 (48)
Q Consensus 10 nrvmasnaetarnaflihpkwillspnnvm 39 (48)
.+.|++...-.-|.|||-|++|-++.+.|-
T Consensus 21 ~~L~~~~~~LtynDfliLPg~idF~s~eVs 50 (503)
T KOG2550 21 QELFDSKIGLTYNDFLILPGFIDFASDEVS 50 (503)
T ss_pred HHHHHCCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 998624457652434632553455433120
No 7
>KOG1551 consensus
Probab=8.98 E-value=2e+02 Score=13.39 Aligned_cols=26 Identities=42% Similarity=0.425 Sum_probs=17.9
Q ss_pred EECCCCCCCCEEEECCEEEEECCCCCEEEEEEEEE
Q ss_conf 31353100215665323899867551100335663
Q 537021.9.peg.1 13 MASNAETARNAFLIHPKWILLSPNNVMAPLNLFLF 47 (48)
Q Consensus 13 masnaetarnaflihpkwillspnnvmaplnlflf 47 (48)
|..|..|||-+.+|- .-|||++|++-
T Consensus 95 mP~~~~~A~~~~liP---------QK~~~lcl~~a 120 (371)
T KOG1551 95 MPPESRTARVAWLIP---------QKMADLCLSWA 120 (371)
T ss_pred CCCCCCCEEEEEECC---------CCCCCEEEEEE
T ss_conf 997445200233336---------67677148985
No 8
>pfam07349 DUF1478 Protein of unknown function (DUF1478). This family consists of several hypothetical Sapovirus proteins of around 165 residues in length. The function of this family is unknown.
Probab=6.76 E-value=99 Score=14.87 Aligned_cols=21 Identities=43% Similarity=0.593 Sum_probs=17.1
Q ss_pred EECCEEEEECCCCCEEEEEEE
Q ss_conf 653238998675511003356
Q 537021.9.peg.1 25 LIHPKWILLSPNNVMAPLNLF 45 (48)
Q Consensus 25 lihpkwillspnnvmaplnlf 45 (48)
--||.|.++--||-|.|-|-.
T Consensus 25 rphp~ll~lI~nNpmgp~nAW 45 (162)
T pfam07349 25 RPHPMLLLLIRNNPMGPHNAW 45 (162)
T ss_pred CCCCCHHHHHHCCCCCCCCHH
T ss_conf 888402476633899995267
No 9
>PRK02946 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein; Validated
Probab=5.60 E-value=2.2e+02 Score=13.18 Aligned_cols=29 Identities=34% Similarity=0.608 Sum_probs=17.7
Q ss_pred ECCCCCCCCEEEECCEEEEECCCCCEEEEEEEE
Q ss_conf 135310021566532389986755110033566
Q 537021.9.peg.1 14 ASNAETARNAFLIHPKWILLSPNNVMAPLNLFL 46 (48)
Q Consensus 14 asnaetarnaflihpkwillspnnvmaplnlfl 46 (48)
+|.-|...+...|+--|| ..-|.||||||
T Consensus 404 ~~~~~~~~d~~ii~hly~----eRrm~PLnlyl 432 (580)
T PRK02946 404 PSSLEDEGDELVIRHLYI----ERRMTPLNLYL 432 (580)
T ss_pred CCCEEECCCEEEEEEEEE----EECCCCHHHHH
T ss_conf 500898387799776455----40100345677
No 10
>pfam04885 Stig1 Stigma-specific protein, Stig1. This family represents the Stig1 cysteine rich plant protein. The STIG1 gene is developmentally regulated and expressed specifically in the stigmatic secretory zone.
Probab=5.51 E-value=3.1e+02 Score=12.50 Aligned_cols=43 Identities=9% Similarity=-0.042 Sum_probs=32.9
Q ss_pred EEEECCCCEEECCCCCCCCEEEECCEEEEECCCCCEEEEEEEE
Q ss_conf 6887353023135310021566532389986755110033566
Q 537021.9.peg.1 4 KVMVHPNRVMASNAETARNAFLIHPKWILLSPNNVMAPLNLFL 46 (48)
Q Consensus 4 kvmvhpnrvmasnaetarnaflihpkwillspnnvmaplnlfl 46 (48)
-.++++--++.|...+....+....-|.++++..+-.+..+++
T Consensus 7 ~l~v~~~~i~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 49 (136)
T pfam04885 7 ALSLTIAAISTSSPTTDTTSTTNDYTSSALAAAKNSPRPPRLL 49 (136)
T ss_pred EEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH
T ss_conf 7666543222037888742214665302212045667896044
Done!