RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= 537021.9.peg.1087_1 (48 letters) >1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} (A:1-149) Length = 149 Score = 25.1 bits (55), Expect = 3.4 Identities = 7/26 (26%), Positives = 13/26 (50%) Query: 1 MKTKVMVHPNRVMASNAETARNAFLI 26 M+T+ P + + E R+ FL+ Sbjct: 6 METRYTHSPADIRHYSTEQLRDEFLV 31 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.327 0.134 0.414 Gapped Lambda K H 0.267 0.0679 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 313,035 Number of extensions: 7727 Number of successful extensions: 26 Number of sequences better than 10.0: 1 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 1 Length of query: 48 Length of database: 4,956,049 Length adjustment: 19 Effective length of query: 29 Effective length of database: 4,313,754 Effective search space: 125098866 Effective search space used: 125098866 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 50 (23.1 bits)