Query 537021.9.peg.109_1 Match_columns 66 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Mon May 23 18:44:07 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_109.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2qjza1 a.40.1.1 (A:13-132) Mi 6.0 86 0.0063 12.0 1.4 11 16-26 94-104 (120) 2 d2i5nh2 f.23.10.1 (H:1-36) Pho 5.6 92 0.0067 11.8 2.7 18 13-30 14-31 (36) 3 d1lgha_ f.3.1.1 (A:) Light-har 5.4 95 0.0069 11.7 1.4 13 34-46 13-25 (56) 4 d1eyea_ c.1.21.1 (A:) Dihydrop 4.6 83 0.0061 12.0 0.1 35 18-57 150-184 (270) 5 d1xe7a_ b.82.1.16 (A:) Hypothe 3.8 1E+02 0.0075 11.6 0.1 6 47-52 161-166 (194) 6 d2co5a1 a.4.5.48 (A:5-93) STIV 3.4 1.4E+02 0.01 10.9 1.1 10 33-42 37-46 (89) 7 d2h4oa1 d.368.1.1 (A:2-63) Unc 2.8 1.6E+02 0.012 10.5 0.9 8 49-56 32-39 (62) 8 d1ajza_ c.1.21.1 (A:) Dihydrop 2.7 1.7E+02 0.012 10.4 0.4 41 21-65 164-204 (282) 9 d1iv8a2 c.1.8.1 (A:1-653) Malt 2.6 1.7E+02 0.012 10.4 1.7 15 47-61 12-26 (653) 10 d1dyta_ d.5.1.1 (A:) Eosinophi 2.3 1.9E+02 0.014 10.1 1.0 6 18-23 8-13 (133) No 1 >d2qjza1 a.40.1.1 (A:13-132) Microtubule-associated protein eb1, N-terminal microtubule binding domain {Human (Homo sapiens) [TaxId: 9606]} Probab=6.04 E-value=86 Score=11.97 Aligned_cols=11 Identities=45% Similarity=0.972 Sum_probs=7.6 Q ss_pred HHHHHHHHHHH Q ss_conf 99999999999 Q 537021.9.peg.1 16 HFAQWFLQFSV 26 (66) Q Consensus 16 hfaqwflqfsv 26 (66) .|+|||-.|.- T Consensus 94 eflqWfk~f~d 104 (120) T d2qjza1 94 EFVQWFKKFFD 104 (120) T ss_dssp HHHHHHHHHHH T ss_pred HHHHHHHHHHH T ss_conf 99999999998 No 2 >d2i5nh2 f.23.10.1 (H:1-36) Photosystem II reaction centre subunit H, transmembrane region {Rhodopseudomonas viridis [TaxId: 1079]} Probab=5.56 E-value=92 Score=11.81 Aligned_cols=18 Identities=39% Similarity=0.815 Sum_probs=13.7 Q ss_pred HHHHHHHHHHHHHHHHHH Q ss_conf 999999999999998885 Q 537021.9.peg.1 13 TLSHFAQWFLQFSVSLLL 30 (66) Q Consensus 13 tlshfaqwflqfsvslll 30 (66) .|--+|||..-..|-||. T Consensus 14 qlvwyaqwlviwtvvlly 31 (36) T d2i5nh2 14 QLVWYAQWLVIWTVVLLY 31 (36) T ss_dssp HHHHHHHHHHHHHHHHHT T ss_pred HHHHHHHHHHHHHHHHHH T ss_conf 999999999999999986 No 3 >d1lgha_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]} Probab=5.35 E-value=95 Score=11.73 Aligned_cols=13 Identities=46% Similarity=0.999 Sum_probs=8.0 Q ss_pred CHHHHHHHHHHHC Q ss_conf 2035688899871 Q 537021.9.peg.1 34 ISASVLFPVYWIL 46 (66) Q Consensus 34 isasvlfpvywil 46 (66) |..|.-.||.||. T Consensus 13 inpstwlpviwiv 25 (56) T d1lgha_ 13 INPSTWLPVIWIV 25 (56) T ss_dssp SCHHHHHHHHHHH T ss_pred ECCCCCHHHHHHH T ss_conf 8575440146788 No 4 >d1eyea_ c.1.21.1 (A:) Dihydropteroate synthetase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=4.57 E-value=83 Score=12.04 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=21.6 Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 9999999998885102203568889987167048999757 Q 537021.9.peg.1 18 AQWFLQFSVSLLLSADISASVLFPVYWILPGFDFRKILSL 57 (66) Q Consensus 18 aqwflqfsvslllsadisasvlfpvywilpgfdfrkilsl 57 (66) ..||.+ ....++++.|...- -|+=|||.|-|-..- T Consensus 150 ~~~~~~-~~~~~~~~Gi~~~~----IilDPGiGFgKt~~~ 184 (270) T d1eyea_ 150 RADLLA-SVADAVAAGVDPAR----LVLDPGLGFAKTAQH 184 (270) T ss_dssp HHHHHH-HHHHHHHTTCCGGG----EEEECCTTSSCCHHH T ss_pred HHHHHH-HHHHHHHCCCCCEE----EEECCCCCCCCCCCH T ss_conf 667888-99998750322027----997144355754310 No 5 >d1xe7a_ b.82.1.16 (A:) Hypothetical protein YML079W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=3.79 E-value=1e+02 Score=11.56 Aligned_cols=6 Identities=83% Similarity=1.846 Sum_probs=0.0 Q ss_pred CCCCHH Q ss_conf 670489 Q 537021.9.peg.1 47 PGFDFR 52 (66) Q Consensus 47 pgfdfr 52 (66) |||||. T Consensus 161 PGF~f~ 166 (194) T d1xe7a_ 161 PGFDFE 166 (194) T ss_dssp SCCCGG T ss_pred CCCCHH T ss_conf 886667 No 6 >d2co5a1 a.4.5.48 (A:5-93) STIV F93 {Sulfolobus turreted icosahedral virus [TaxId: 269145]} Probab=3.42 E-value=1.4e+02 Score=10.89 Aligned_cols=10 Identities=60% Similarity=1.095 Sum_probs=0.0 Q ss_pred CCHHHHHHHH Q ss_conf 2203568889 Q 537021.9.peg.1 33 DISASVLFPV 42 (66) Q Consensus 33 disasvlfpv 42 (66) |||..||+|. T Consensus 37 disdgvlypl 46 (89) T d2co5a1 37 DISDGVLYPL 46 (89) T ss_dssp BCCHHHHHHH T ss_pred CCCCCEEHHH T ss_conf 7436760355 No 7 >d2h4oa1 d.368.1.1 (A:2-63) Uncharacterized protein YonK {Bacillus subtilis [TaxId: 1423]} Probab=2.80 E-value=1.6e+02 Score=10.52 Aligned_cols=8 Identities=63% Similarity=1.286 Sum_probs=0.0 Q ss_pred CCHHHHHH Q ss_conf 04899975 Q 537021.9.peg.1 49 FDFRKILS 56 (66) Q Consensus 49 fdfrkils 56 (66) +||..||| T Consensus 32 ydfkeils 39 (62) T d2h4oa1 32 YDFKEILS 39 (62) T ss_dssp EEHHHHHH T ss_pred ECHHHHHH T ss_conf 22999999 No 8 >d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]} Probab=2.67 E-value=1.7e+02 Score=10.44 Aligned_cols=41 Identities=32% Similarity=0.414 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC Q ss_conf 999999888510220356888998716704899975766654212 Q 537021.9.peg.1 21 FLQFSVSLLLSADISASVLFPVYWILPGFDFRKILSLRDYILCRL 65 (66) Q Consensus 21 flqfsvslllsadisasvlfpvywilpgfdfrkilslrdyilcrl 65 (66) |+.-.+..+.++.|...-+ |+=|||.|-|-..-.-.++-++ T Consensus 164 ~~~~~~~~~~~~GI~~~~I----ilDPGiGFgK~~~~n~~ll~~l 204 (282) T d1ajza_ 164 YFIEQIARCEQAGIAKEKL----LLDPGFGFGKNLSHNYSLLARL 204 (282) T ss_dssp HHHHHHHHHHHTTCCGGGE----EEECCTTSSCCHHHHHHHHHTG T ss_pred HHHHHHHHHHHCCCCHHHE----ECCCCCCCCCCHHHHHHHHHHC T ss_conf 9988888998759857617----1678867588724417998610 No 9 >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Probab=2.63 E-value=1.7e+02 Score=10.41 Aligned_cols=15 Identities=20% Similarity=0.452 Sum_probs=0.0 Q ss_pred CCCCHHHHHHHHHHH Q ss_conf 670489997576665 Q 537021.9.peg.1 47 PGFDFRKILSLRDYI 61 (66) Q Consensus 47 pgfdfrkilslrdyi 61 (66) +||||..+...-||| T Consensus 12 ~gftF~~~~~~LpYL 26 (653) T d1iv8a2 12 KNFNFGDVIDNLWYF 26 (653) T ss_dssp TTBCHHHHHHTHHHH T ss_pred CCCCHHHHHHHHHHH T ss_conf 999999999825799 No 10 >d1dyta_ d.5.1.1 (A:) Eosinophil cationic protein (ECP), ribonuclease 3 {Human (Homo sapiens) [TaxId: 9606]} Probab=2.28 E-value=1.9e+02 Score=10.15 Aligned_cols=6 Identities=67% Similarity=1.287 Sum_probs=0.0 Q ss_pred HHHHHH Q ss_conf 999999 Q 537021.9.peg.1 18 AQWFLQ 23 (66) Q Consensus 18 aqwflq 23 (66) ||||+. T Consensus 8 ~q~F~~ 13 (133) T d1dyta_ 8 AQWFAI 13 (133) T ss_dssp HHHHHH T ss_pred HHHHHH T ss_conf 886766 Done!