Query         537021.9.peg.109_1
Match_columns 66
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Mon May 23 18:44:07 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_109.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2qjza1 a.40.1.1 (A:13-132) Mi   6.0      86  0.0063   12.0   1.4   11   16-26     94-104 (120)
  2 d2i5nh2 f.23.10.1 (H:1-36) Pho   5.6      92  0.0067   11.8   2.7   18   13-30     14-31  (36)
  3 d1lgha_ f.3.1.1 (A:) Light-har   5.4      95  0.0069   11.7   1.4   13   34-46     13-25  (56)
  4 d1eyea_ c.1.21.1 (A:) Dihydrop   4.6      83  0.0061   12.0   0.1   35   18-57    150-184 (270)
  5 d1xe7a_ b.82.1.16 (A:) Hypothe   3.8   1E+02  0.0075   11.6   0.1    6   47-52    161-166 (194)
  6 d2co5a1 a.4.5.48 (A:5-93) STIV   3.4 1.4E+02    0.01   10.9   1.1   10   33-42     37-46  (89)
  7 d2h4oa1 d.368.1.1 (A:2-63) Unc   2.8 1.6E+02   0.012   10.5   0.9    8   49-56     32-39  (62)
  8 d1ajza_ c.1.21.1 (A:) Dihydrop   2.7 1.7E+02   0.012   10.4   0.4   41   21-65    164-204 (282)
  9 d1iv8a2 c.1.8.1 (A:1-653) Malt   2.6 1.7E+02   0.012   10.4   1.7   15   47-61     12-26  (653)
 10 d1dyta_ d.5.1.1 (A:) Eosinophi   2.3 1.9E+02   0.014   10.1   1.0    6   18-23      8-13  (133)

No 1  
>d2qjza1 a.40.1.1 (A:13-132) Microtubule-associated protein eb1, N-terminal microtubule binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.04  E-value=86  Score=11.97  Aligned_cols=11  Identities=45%  Similarity=0.972  Sum_probs=7.6

Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999999
Q 537021.9.peg.1   16 HFAQWFLQFSV   26 (66)
Q Consensus        16 hfaqwflqfsv   26 (66)
                      .|+|||-.|.-
T Consensus        94 eflqWfk~f~d  104 (120)
T d2qjza1          94 EFVQWFKKFFD  104 (120)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999998


No 2  
>d2i5nh2 f.23.10.1 (H:1-36) Photosystem II reaction centre subunit H, transmembrane region {Rhodopseudomonas viridis [TaxId: 1079]}
Probab=5.56  E-value=92  Score=11.81  Aligned_cols=18  Identities=39%  Similarity=0.815  Sum_probs=13.7

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999998885
Q 537021.9.peg.1   13 TLSHFAQWFLQFSVSLLL   30 (66)
Q Consensus        13 tlshfaqwflqfsvslll   30 (66)
                      .|--+|||..-..|-||.
T Consensus        14 qlvwyaqwlviwtvvlly   31 (36)
T d2i5nh2          14 QLVWYAQWLVIWTVVLLY   31 (36)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999986


No 3  
>d1lgha_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=5.35  E-value=95  Score=11.73  Aligned_cols=13  Identities=46%  Similarity=0.999  Sum_probs=8.0

Q ss_pred             CHHHHHHHHHHHC
Q ss_conf             2035688899871
Q 537021.9.peg.1   34 ISASVLFPVYWIL   46 (66)
Q Consensus        34 isasvlfpvywil   46 (66)
                      |..|.-.||.||.
T Consensus        13 inpstwlpviwiv   25 (56)
T d1lgha_          13 INPSTWLPVIWIV   25 (56)
T ss_dssp             SCHHHHHHHHHHH
T ss_pred             ECCCCCHHHHHHH
T ss_conf             8575440146788


No 4  
>d1eyea_ c.1.21.1 (A:) Dihydropteroate synthetase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.57  E-value=83  Score=12.04  Aligned_cols=35  Identities=23%  Similarity=0.271  Sum_probs=21.6

Q ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             9999999998885102203568889987167048999757
Q 537021.9.peg.1   18 AQWFLQFSVSLLLSADISASVLFPVYWILPGFDFRKILSL   57 (66)
Q Consensus        18 aqwflqfsvslllsadisasvlfpvywilpgfdfrkilsl   57 (66)
                      ..||.+ ....++++.|...-    -|+=|||.|-|-..-
T Consensus       150 ~~~~~~-~~~~~~~~Gi~~~~----IilDPGiGFgKt~~~  184 (270)
T d1eyea_         150 RADLLA-SVADAVAAGVDPAR----LVLDPGLGFAKTAQH  184 (270)
T ss_dssp             HHHHHH-HHHHHHHTTCCGGG----EEEECCTTSSCCHHH
T ss_pred             HHHHHH-HHHHHHHCCCCCEE----EEECCCCCCCCCCCH
T ss_conf             667888-99998750322027----997144355754310


No 5  
>d1xe7a_ b.82.1.16 (A:) Hypothetical protein YML079W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.79  E-value=1e+02  Score=11.56  Aligned_cols=6  Identities=83%  Similarity=1.846  Sum_probs=0.0

Q ss_pred             CCCCHH
Q ss_conf             670489
Q 537021.9.peg.1   47 PGFDFR   52 (66)
Q Consensus        47 pgfdfr   52 (66)
                      |||||.
T Consensus       161 PGF~f~  166 (194)
T d1xe7a_         161 PGFDFE  166 (194)
T ss_dssp             SCCCGG
T ss_pred             CCCCHH
T ss_conf             886667


No 6  
>d2co5a1 a.4.5.48 (A:5-93) STIV F93 {Sulfolobus turreted icosahedral virus [TaxId: 269145]}
Probab=3.42  E-value=1.4e+02  Score=10.89  Aligned_cols=10  Identities=60%  Similarity=1.095  Sum_probs=0.0

Q ss_pred             CCHHHHHHHH
Q ss_conf             2203568889
Q 537021.9.peg.1   33 DISASVLFPV   42 (66)
Q Consensus        33 disasvlfpv   42 (66)
                      |||..||+|.
T Consensus        37 disdgvlypl   46 (89)
T d2co5a1          37 DISDGVLYPL   46 (89)
T ss_dssp             BCCHHHHHHH
T ss_pred             CCCCCEEHHH
T ss_conf             7436760355


No 7  
>d2h4oa1 d.368.1.1 (A:2-63) Uncharacterized protein YonK {Bacillus subtilis [TaxId: 1423]}
Probab=2.80  E-value=1.6e+02  Score=10.52  Aligned_cols=8  Identities=63%  Similarity=1.286  Sum_probs=0.0

Q ss_pred             CCHHHHHH
Q ss_conf             04899975
Q 537021.9.peg.1   49 FDFRKILS   56 (66)
Q Consensus        49 fdfrkils   56 (66)
                      +||..|||
T Consensus        32 ydfkeils   39 (62)
T d2h4oa1          32 YDFKEILS   39 (62)
T ss_dssp             EEHHHHHH
T ss_pred             ECHHHHHH
T ss_conf             22999999


No 8  
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}
Probab=2.67  E-value=1.7e+02  Score=10.44  Aligned_cols=41  Identities=32%  Similarity=0.414  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
Q ss_conf             999999888510220356888998716704899975766654212
Q 537021.9.peg.1   21 FLQFSVSLLLSADISASVLFPVYWILPGFDFRKILSLRDYILCRL   65 (66)
Q Consensus        21 flqfsvslllsadisasvlfpvywilpgfdfrkilslrdyilcrl   65 (66)
                      |+.-.+..+.++.|...-+    |+=|||.|-|-..-.-.++-++
T Consensus       164 ~~~~~~~~~~~~GI~~~~I----ilDPGiGFgK~~~~n~~ll~~l  204 (282)
T d1ajza_         164 YFIEQIARCEQAGIAKEKL----LLDPGFGFGKNLSHNYSLLARL  204 (282)
T ss_dssp             HHHHHHHHHHHTTCCGGGE----EEECCTTSSCCHHHHHHHHHTG
T ss_pred             HHHHHHHHHHHCCCCHHHE----ECCCCCCCCCCHHHHHHHHHHC
T ss_conf             9988888998759857617----1678867588724417998610


No 9  
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=2.63  E-value=1.7e+02  Score=10.41  Aligned_cols=15  Identities=20%  Similarity=0.452  Sum_probs=0.0

Q ss_pred             CCCCHHHHHHHHHHH
Q ss_conf             670489997576665
Q 537021.9.peg.1   47 PGFDFRKILSLRDYI   61 (66)
Q Consensus        47 pgfdfrkilslrdyi   61 (66)
                      +||||..+...-|||
T Consensus        12 ~gftF~~~~~~LpYL   26 (653)
T d1iv8a2          12 KNFNFGDVIDNLWYF   26 (653)
T ss_dssp             TTBCHHHHHHTHHHH
T ss_pred             CCCCHHHHHHHHHHH
T ss_conf             999999999825799


No 10 
>d1dyta_ d.5.1.1 (A:) Eosinophil cationic protein (ECP), ribonuclease 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.28  E-value=1.9e+02  Score=10.15  Aligned_cols=6  Identities=67%  Similarity=1.287  Sum_probs=0.0

Q ss_pred             HHHHHH
Q ss_conf             999999
Q 537021.9.peg.1   18 AQWFLQ   23 (66)
Q Consensus        18 aqwflq   23 (66)
                      ||||+.
T Consensus         8 ~q~F~~   13 (133)
T d1dyta_           8 AQWFAI   13 (133)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             886766


Done!