RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.1101_1
         (37 letters)



>gnl|CDD|185396 PTZ00010, PTZ00010, tubulin beta chain; Provisional.
          Length = 445

 Score = 24.7 bits (54), Expect = 5.1
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 4   KSLDWIYFGDEMIIPKKLECSSDLNHVSYLSLA 36
           + L       +M   K + C++D  H  YL+ +
Sbjct: 282 RGLSVPELTQQMFDAKNMMCAADPRHGRYLTAS 314


>gnl|CDD|177728 PLN00113, PLN00113, leucine-rich repeat receptor-like protein
           kinase; Provisional.
          Length = 968

 Score = 24.0 bits (52), Expect = 9.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)

Query: 4   KSLDWIYFGDEMI---IPKKLECSSDLNHV 30
           KSL WIY G   +   IP ++   + LNH+
Sbjct: 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHL 241


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.320    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0653    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 564,169
Number of extensions: 15069
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 4
Length of query: 37
Length of database: 5,994,473
Length adjustment: 11
Effective length of query: 26
Effective length of database: 5,756,785
Effective search space: 149676410
Effective search space used: 149676410
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.2 bits)