Query 537021.9.peg.1120_1
Match_columns 40
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed May 25 08:42:34 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1120.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1gqo_A Dehydroquinase, dhqase 14.3 45 0.0013 16.5 0.1 24 9-32 16-39 (143)
2 >1h05_A 3-dehydroquinate dehyd 12.7 49 0.0014 16.3 -0.1 24 9-32 18-41 (146)
3 >1uqr_A 3-dehydroquinate dehyd 11.8 65 0.0019 15.7 0.3 24 9-32 17-40 (154)
4 >1gtz_A 3-dehydroquinate dehyd 11.7 60 0.0018 15.9 0.1 22 9-30 22-43 (156)
5 >1u1j_A 5-methyltetrahydropter 10.3 58 0.0017 16.0 -0.4 21 2-22 5-25 (142)
6 >1j5p_A Aspartate dehydrogenas 8.9 1.2E+02 0.0036 14.6 0.8 10 17-26 133-142 (146)
7 >2uyg_A 3-dehydroquinate dehyd 8.0 72 0.0021 15.5 -0.6 24 9-32 15-38 (149)
8 >2c4w_A 3-dehydroquinate dehyd 7.7 1.1E+02 0.0033 14.7 0.2 24 9-32 25-48 (176)
9 >3kk7_A Putative cell invasion 6.9 1.2E+02 0.0035 14.6 0.1 24 2-25 24-48 (106)
10 >1yt8_A Thiosulfate sulfurtran 4.7 3.2E+02 0.0095 12.6 1.2 23 3-25 77-99 (178)
No 1
>>1gqo_A Dehydroquinase, dhqase; dehydratase; 2.10A {Bacillus subtilis} (A:)
Probab=14.30 E-value=45 Score=16.47 Aligned_cols=24 Identities=38% Similarity=0.475 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 522345444556666536102333
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESST 32 (40)
Q Consensus 9 prekevvgsrtlrniekkpkesst 32 (40)
-||.++-|+.||..|+++-++...
T Consensus 16 ~Rep~iYG~~tl~~i~~~~~~~a~ 39 (143)
T 1gqo_A 16 SREPEVFGRQTLTDIETDLFQFAE 39 (143)
T ss_dssp SSCHHHHCSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 878874786599999999999999
No 2
>>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} (A:)
Probab=12.71 E-value=49 Score=16.29 Aligned_cols=24 Identities=21% Similarity=0.230 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 522345444556666536102333
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESST 32 (40)
Q Consensus 9 prekevvgsrtlrniekkpkesst 32 (40)
-||.++-|+.||..|+++-++-..
T Consensus 18 ~Rep~iYG~~tl~~i~~~~~~~a~ 41 (146)
T 1h05_A 18 RREPAVYGGTTHDELVALIEREAA 41 (146)
T ss_dssp TC------CCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 878863885699999999999999
No 3
>>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} (A:)
Probab=11.75 E-value=65 Score=15.75 Aligned_cols=24 Identities=38% Similarity=0.587 Sum_probs=19.6
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 522345444556666536102333
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESST 32 (40)
Q Consensus 9 prekevvgsrtlrniekkpkesst 32 (40)
-||.++-|+.||..|+++-++...
T Consensus 17 ~REp~iYG~~tl~~i~~~~~~~a~ 40 (154)
T 1uqr_A 17 KREPHIYGSQTLSDIEQHLQQSAQ 40 (154)
T ss_dssp CSSGGGTTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 878975884589999999999998
No 4
>>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} (A:)
Probab=11.66 E-value=60 Score=15.90 Aligned_cols=22 Identities=27% Similarity=0.368 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHHHHCCHHH
Q ss_conf 5223454445566665361023
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKES 30 (40)
Q Consensus 9 prekevvgsrtlrniekkpkes 30 (40)
-||.++-|+.||..|+..-++-
T Consensus 22 ~Rep~iYG~~tl~~i~~~~~~~ 43 (156)
T 1gtz_A 22 QAQPEIYGSDTLADVEALCVKA 43 (156)
T ss_dssp TSCHHHHCSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8788718856999999999999
No 5
>>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} (A:430-487,A:682-765)
Probab=10.27 E-value=58 Score=15.98 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=15.6
Q ss_pred CHHHCCCCCHHHHHHHHHHHH
Q ss_conf 213203852234544455666
Q 537021.9.peg.1 2 KSIIGNFPREKEVVGSRTLRN 22 (40)
Q Consensus 2 ksiignfprekevvgsrtlrn 22 (40)
-+++|.|||-+++.-.|...+
T Consensus 5 tt~vGS~prp~~L~~ar~~~~ 25 (142)
T 1u1j_A 5 TTTIGSFPQTVELRRVRREYK 25 (142)
T ss_dssp BBCCSBCCCCSCCC-------
T ss_pred CCCCCCCCCCHHHHHHHHHHH
T ss_conf 675258989889999999976
No 6
>>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: NAD; 1.90A {Thermotoga maritima} (A:1-120,A:228-253)
Probab=8.85 E-value=1.2e+02 Score=14.55 Aligned_cols=10 Identities=70% Similarity=0.909 Sum_probs=7.4
Q ss_pred HHHHHHHHHC
Q ss_conf 4556666536
Q 537021.9.peg.1 17 SRTLRNIEKK 26 (40)
Q Consensus 17 srtlrniekk 26 (40)
-|||||.|.|
T Consensus 133 ~~~~~~~~~~ 142 (146)
T 1j5p_A 133 LRTLRNLESK 142 (146)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHCCCCC
T ss_conf 9998617788
No 7
>>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus} (A:)
Probab=7.96 E-value=72 Score=15.54 Aligned_cols=24 Identities=33% Similarity=0.368 Sum_probs=19.6
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 522345444556666536102333
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESST 32 (40)
Q Consensus 9 prekevvgsrtlrniekkpkesst 32 (40)
-||.++-|..||..|+++-++-..
T Consensus 15 ~Rep~iYG~~tl~~i~~~~~~~a~ 38 (149)
T 2uyg_A 15 RREPEVYGRTTLEELEALCEAWGA 38 (149)
T ss_dssp TSCSSSSCSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 878874775699999999999999
No 8
>>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2c4v_A* 1j2y_A* (A:)
Probab=7.72 E-value=1.1e+02 Score=14.72 Aligned_cols=24 Identities=21% Similarity=0.220 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 522345444556666536102333
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESST 32 (40)
Q Consensus 9 prekevvgsrtlrniekkpkesst 32 (40)
-||.++-|+.||..|+..-++-..
T Consensus 25 ~ReP~iYG~~Tl~~i~~~~~~~a~ 48 (176)
T 2c4w_A 25 HRDPRLYGMVTLDQIHEIMQTFVK 48 (176)
T ss_dssp TTBCGGGTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 878864884699999999999999
No 9
>>3kk7_A Putative cell invasion protein with MAC/perforin domain; structural genomics, joint center for structural genomics, JCSG; 2.46A {Bacteroides thetaiotaomicron vpi-5482} (A:43-80,A:176-214,A:341-369)
Probab=6.92 E-value=1.2e+02 Score=14.57 Aligned_cols=24 Identities=46% Similarity=0.703 Sum_probs=17.5
Q ss_pred CHHHCCCCCHH-HHHHHHHHHHHHH
Q ss_conf 21320385223-4544455666653
Q 537021.9.peg.1 2 KSIIGNFPREK-EVVGSRTLRNIEK 25 (40)
Q Consensus 2 ksiignfprek-evvgsrtlrniek 25 (40)
.||||.|...+ .+|....||.|..
T Consensus 24 tsiigdf~na~~pivapsalr~i~a 48 (106)
T 3kk7_A 24 TSIIGDFANAKYPVVAPSALRKIAA 48 (106)
T ss_dssp CSCTTCGGGEEEESBCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 6344676410365204763678887
No 10
>>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} (A:113-240,A:490-539)
Probab=4.69 E-value=3.2e+02 Score=12.64 Aligned_cols=23 Identities=22% Similarity=0.400 Sum_probs=18.3
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 13203852234544455666653
Q 537021.9.peg.1 3 SIIGNFPREKEVVGSRTLRNIEK 25 (40)
Q Consensus 3 siignfprekevvgsrtlrniek 25 (40)
-|+.-|-|...++|.++|.|+--
T Consensus 77 ~~~~cagRtrsIIGaqSLinaGi 99 (178)
T 1yt8_A 77 VIVNCAGRTRSIIGTQSLLNAGI 99 (178)
T ss_dssp EEEECSSSHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHCCC
T ss_conf 99989999625899999997699
Done!