Query 537021.9.peg.1120_1
Match_columns 40
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 07:09:28 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1120.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uqra_ c.23.13.1 (A:) Type II 19.2 13 0.00093 17.2 0.3 23 9-31 17-39 (146)
2 d1h05a_ c.23.13.1 (A:) Type II 13.0 20 0.0015 16.2 0.1 23 9-31 16-38 (144)
3 d1gqoa_ c.23.13.1 (A:) Type II 9.9 30 0.0022 15.5 0.1 24 9-32 16-39 (141)
4 d1gtza_ c.23.13.1 (A:) Type II 9.9 34 0.0025 15.3 0.4 24 9-32 21-44 (149)
5 d2c4va1 c.23.13.1 (A:1-158) Ty 9.5 36 0.0026 15.1 0.4 22 9-30 16-37 (158)
6 d2nr4a1 b.45.1.4 (A:19-210) Hy 8.0 47 0.0034 14.6 0.5 17 12-28 40-56 (192)
7 d2ptfa1 b.45.1.4 (A:15-220) Un 7.9 48 0.0035 14.6 0.4 15 14-28 53-67 (206)
8 d2imla1 b.45.1.4 (A:1-189) Hyp 6.7 57 0.0041 14.3 0.3 14 15-28 48-61 (189)
9 d1u1ha2 c.1.22.2 (A:396-760) 5 5.9 52 0.0038 14.4 -0.2 14 2-15 39-52 (365)
10 d1flma_ b.45.1.1 (A:) FMN-bind 5.6 92 0.0067 13.3 0.9 18 14-31 49-66 (122)
No 1
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=19.21 E-value=13 Score=17.15 Aligned_cols=23 Identities=39% Similarity=0.612 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 52234544455666653610233
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESS 31 (40)
Q Consensus 9 prekevvgsrtlrniekkpkess 31 (40)
-||.++-|+.||..|+++-++..
T Consensus 17 ~Rep~iYG~~TL~~i~~~~~~~~ 39 (146)
T d1uqra_ 17 KREPHIYGSQTLSDIEQHLQQSA 39 (146)
T ss_dssp CSSGGGTTCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 77887488458999999999999
No 2
>d1h05a_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=13.03 E-value=20 Score=16.24 Aligned_cols=23 Identities=22% Similarity=0.231 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 52234544455666653610233
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESS 31 (40)
Q Consensus 9 prekevvgsrtlrniekkpkess 31 (40)
-||.++-|+.||-.|+++-++..
T Consensus 16 ~Rep~iYG~~TL~~i~~~~~~~a 38 (144)
T d1h05a_ 16 RREPAVYGGTTHDELVALIEREA 38 (144)
T ss_dssp TC------CCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 88886388478999999999999
No 3
>d1gqoa_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Bacillus subtilis [TaxId: 1423]}
Probab=9.92 E-value=30 Score=15.47 Aligned_cols=24 Identities=38% Similarity=0.475 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 522345444556666536102333
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESST 32 (40)
Q Consensus 9 prekevvgsrtlrniekkpkesst 32 (40)
-||.++-|+.||-.|+++-++...
T Consensus 16 ~Rep~iYG~~TL~~i~~~~~~~a~ 39 (141)
T d1gqoa_ 16 SREPEVFGRQTLTDIETDLFQFAE 39 (141)
T ss_dssp SSCHHHHCSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 878873886599999999999999
No 4
>d1gtza_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Streptomyces coelicolor [TaxId: 1902]}
Probab=9.91 E-value=34 Score=15.26 Aligned_cols=24 Identities=25% Similarity=0.361 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 522345444556666536102333
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKESST 32 (40)
Q Consensus 9 prekevvgsrtlrniekkpkesst 32 (40)
-||.++-|+.||..|++.-++...
T Consensus 21 ~Rep~iYG~~tL~~i~~~~~~~a~ 44 (149)
T d1gtza_ 21 QAQPEIYGSDTLADVEALCVKAAA 44 (149)
T ss_dssp TSCHHHHCSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 778851785579999999999999
No 5
>d2c4va1 c.23.13.1 (A:1-158) Type II 3-dehydroquinate dehydratase {Helicobacter pylori [TaxId: 210]}
Probab=9.54 E-value=36 Score=15.14 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=18.1
Q ss_pred CCHHHHHHHHHHHHHHHCCHHH
Q ss_conf 5223454445566665361023
Q 537021.9.peg.1 9 PREKEVVGSRTLRNIEKKPKES 30 (40)
Q Consensus 9 prekevvgsrtlrniekkpkes 30 (40)
-||.++-|+.||..|++.-++.
T Consensus 16 ~Re~~iYG~~TL~~i~~~~~~~ 37 (158)
T d2c4va1 16 HRDPRLYGMVTLDQIHEIMQTF 37 (158)
T ss_dssp SSCHHHHTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8788658855899999999999
No 6
>d2nr4a1 b.45.1.4 (A:19-210) Hypothetical protein MM1853 {Methanosarcina mazei [TaxId: 2209]}
Probab=8.01 E-value=47 Score=14.61 Aligned_cols=17 Identities=29% Similarity=0.296 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHCCH
Q ss_conf 34544455666653610
Q 537021.9.peg.1 12 KEVVGSRTLRNIEKKPK 28 (40)
Q Consensus 12 kevvgsrtlrniekkpk 28 (40)
+---||+|++||+..+.
T Consensus 40 ~~Fk~S~T~~Ni~~~~~ 56 (192)
T d2nr4a1 40 RLFKGSHTWENVLKEKC 56 (192)
T ss_dssp EEETTSHHHHHHHHHCE
T ss_pred EECCCCCHHHHHHHCCE
T ss_conf 97799864999974691
No 7
>d2ptfa1 b.45.1.4 (A:15-220) Uncharacterized protein MTH863 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=7.87 E-value=48 Score=14.60 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHCCH
Q ss_conf 544455666653610
Q 537021.9.peg.1 14 VVGSRTLRNIEKKPK 28 (40)
Q Consensus 14 vvgsrtlrniekkpk 28 (40)
--||+|++|+...+.
T Consensus 53 F~~S~T~~Nl~~~~~ 67 (206)
T d2ptfa1 53 YQGTRTVENVLNNGR 67 (206)
T ss_dssp ETTCHHHHHHHHHSE
T ss_pred CCCCCHHHHHHHCCE
T ss_conf 399706999863693
No 8
>d2imla1 b.45.1.4 (A:1-189) Hypothetical protein AF1834 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=6.70 E-value=57 Score=14.26 Aligned_cols=14 Identities=29% Similarity=0.309 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHCCH
Q ss_conf 44455666653610
Q 537021.9.peg.1 15 VGSRTLRNIEKKPK 28 (40)
Q Consensus 15 vgsrtlrniekkpk 28 (40)
-+|+|++|++..+.
T Consensus 48 ~~S~T~~Nl~~~~~ 61 (189)
T d2imla1 48 YRNRTRANLERSGV 61 (189)
T ss_dssp CSSHHHHHHHHHCE
T ss_pred CCCCHHHHHHHCCE
T ss_conf 78861899975791
No 9
>d1u1ha2 c.1.22.2 (A:396-760) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=5.85 E-value=52 Score=14.43 Aligned_cols=14 Identities=36% Similarity=0.719 Sum_probs=10.1
Q ss_pred CHHHCCCCCHHHHH
Q ss_conf 21320385223454
Q 537021.9.peg.1 2 KSIIGNFPREKEVV 15 (40)
Q Consensus 2 ksiignfprekevv 15 (40)
.++||.|||-+++.
T Consensus 39 TT~VGS~PRp~eLk 52 (365)
T d1u1ha2 39 TTTIGSFPQTVELR 52 (365)
T ss_dssp BBCCSBCCCCSCCC
T ss_pred CCCCCCCCCCHHHH
T ss_conf 23247788998999
No 10
>d1flma_ b.45.1.1 (A:) FMN-binding protein {Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]}
Probab=5.55 E-value=92 Score=13.33 Aligned_cols=18 Identities=11% Similarity=-0.027 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHCCHHHH
Q ss_conf 544455666653610233
Q 537021.9.peg.1 14 VVGSRTLRNIEKKPKESS 31 (40)
Q Consensus 14 vvgsrtlrniekkpkess 31 (40)
..++++.+||.+.|+-+-
T Consensus 49 ~~~~~k~~Ni~~np~V~l 66 (122)
T d1flma_ 49 GGMHKTEANVARDERVLM 66 (122)
T ss_dssp SSCHHHHHHHHHCCEEEE
T ss_pred CCCCHHHHHHHHCCCEEE
T ss_conf 687747888731896899
Done!