Query 537021.9.peg.1128_1
Match_columns 41
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed May 25 06:55:30 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1128.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2jhp_A VP4 core protein; guan 23.1 7.9 0.00023 20.0 -2.1 18 16-33 52-69 (94)
2 >3c7f_A Xylanase D, endo-1,4-b 20.1 21 0.00061 18.1 -0.5 17 20-36 37-53 (94)
3 >1so2_A CGMP-inhibited 3',5'-c 16.7 37 0.0011 17.0 0.2 12 30-41 51-62 (65)
4 >1z7m_E ATP phosphoribosyltran 11.0 46 0.0013 16.5 -0.7 30 4-33 81-110 (121)
5 >3brd_D Protein LIN-12; protei 9.1 1E+02 0.003 14.9 0.6 13 13-25 6-18 (29)
6 >1gsk_A COTA, spore coat prote 5.4 2.1E+02 0.0061 13.5 0.6 20 14-33 68-93 (171)
7 >1hfu_A Laccase 1; oxidoreduct 5.2 2.1E+02 0.0064 13.4 0.6 19 15-33 60-83 (169)
8 >3fo3_A Eight-heme nitrite red 5.1 3.1E+02 0.0092 12.7 1.4 17 25-41 50-66 (123)
9 >2q9o_A Laccase-1; multicopper 4.5 2.3E+02 0.0069 13.3 0.4 18 16-33 67-89 (175)
10 >2iu8_A LPXD, UDP-3-O-[3-hydro 4.0 2.7E+02 0.0081 13.0 0.4 29 6-34 44-72 (122)
No 1
>>2jhp_A VP4 core protein; guanylyltransferase, viral capping enzyme, virion protein, methyltransferase, viral protein; HET: SAH GUN; 2.5A {Bluetongue virus 10} PDB: 2jh8_A* 2jha_A* 2jhc_A* 2jh9_A* (A:1-94)
Probab=23.15 E-value=7.9 Score=20.03 Aligned_cols=18 Identities=39% Similarity=0.584 Sum_probs=14.0
Q ss_pred CEEEEEEEEEECCHHHHH
Q ss_conf 013431233431643663
Q 537021.9.peg.1 16 QRIINASIFQFRGHTFIV 33 (41)
Q Consensus 16 qriinasifqfrghtfiv 33 (41)
-.|-+-||-|.|||.||-
T Consensus 52 G~i~kWsiRQLRgh~FIF 69 (94)
T 2jhp_A 52 GDVSKWTIRQLRGHGFIF 69 (94)
T ss_dssp SCCTTSCHHHHHHTTEEE
T ss_pred CCHHHHHHHHHCCCCEEE
T ss_conf 052243177763660699
No 2
>>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradation, hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* (A:1-31,A:285-347)
Probab=20.05 E-value=21 Score=18.11 Aligned_cols=17 Identities=24% Similarity=0.657 Sum_probs=14.2
Q ss_pred EEEEEEECCHHHHHHHH
Q ss_conf 31233431643663535
Q 537021.9.peg.1 20 NASIFQFRGHTFIVHHL 36 (41)
Q Consensus 20 nasifqfrghtfivhhl 36 (41)
-.|||+|.|..+|+.|-
T Consensus 37 H~sIvefkGkWYifYH~ 53 (94)
T 3c7f_A 37 HHAVFNFKNEWYVVYHA 53 (94)
T ss_dssp CEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCEEEEEEEC
T ss_conf 00699779989999977
No 3
>>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} (A:356-420)
Probab=16.67 E-value=37 Score=16.95 Aligned_cols=12 Identities=42% Similarity=0.714 Sum_probs=9.4
Q ss_pred HHHHHHHHHCCC
Q ss_conf 366353554179
Q 537021.9.peg.1 30 TFIVHHLLLNHR 41 (41)
Q Consensus 30 tfivhhlllnhr 41 (41)
.-|.||||-||.
T Consensus 51 CQitqHLleNHk 62 (65)
T 1so2_A 51 CQLMHHLTENHK 62 (65)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 178899875045
No 4
>>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, allosteric, evolution; 2.90A {Lactococcus lactis} (E:1-90,E:178-208)
Probab=11.00 E-value=46 Score=16.54 Aligned_cols=30 Identities=23% Similarity=0.342 Sum_probs=22.5
Q ss_pred EEEEEECCCCCCCEEEEEEEEEECCHHHHH
Q ss_conf 120010145710013431233431643663
Q 537021.9.peg.1 4 VGAVGFKGFNSSQRIINASIFQFRGHTFIV 33 (41)
Q Consensus 4 vgavgfkgfnssqriinasifqfrghtfiv 33 (41)
|-.+---||.|..-|.|.|-|.|.....|-
T Consensus 81 V~~lldLgFG~~~~~~~~~~~~~~~~~~~~ 110 (121)
T 1z7m_E 81 YYELLYLKIGSTRMIVNKSSFKFKKDKIIE 110 (121)
T ss_dssp EEEEEEETTCCEEEEEEHHHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEECHHHHHHHHHHHH
T ss_conf 176503467877899920220654999999
No 5
>>3brd_D Protein LIN-12; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} (D:)
Probab=9.09 E-value=1e+02 Score=14.92 Aligned_cols=13 Identities=38% Similarity=0.698 Sum_probs=9.9
Q ss_pred CCCCEEEEEEEEE
Q ss_conf 7100134312334
Q 537021.9.peg.1 13 NSSQRIINASIFQ 25 (41)
Q Consensus 13 nssqriinasifq 25 (41)
|...|+|||+.+.
T Consensus 6 ~rkrrmi~a~~w~ 18 (29)
T 3brd_D 6 TRKRRMINASVWM 18 (29)
T ss_pred CCCEEEECCCCCC
T ss_conf 4000455253247
No 6
>>1gsk_A COTA, spore coat protein A; sporulation, laccase; 1.7A {Bacillus subtilis} (A:183-353)
Probab=5.36 E-value=2.1e+02 Score=13.53 Aligned_cols=20 Identities=40% Similarity=0.584 Sum_probs=12.1
Q ss_pred CCCEEEEEEE---E--EE-CCHHHHH
Q ss_conf 1001343123---3--43-1643663
Q 537021.9.peg.1 14 SSQRIINASI---F--QF-RGHTFIV 33 (41)
Q Consensus 14 ssqriinasi---f--qf-rghtfiv 33 (41)
-.-|+|||+. | .+ .||+|.|
T Consensus 68 ~RlR~iNa~~~~~~~~~~i~gh~~~v 93 (171)
T 1gsk_A 68 YRFRVINASNTRTYNLSLDNGGDFIQ 93 (171)
T ss_dssp EEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred EEEEEEECCCCEEEEEEECCCCCEEE
T ss_conf 89999812686269999826981799
No 7
>>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} (A:137-305)
Probab=5.16 E-value=2.1e+02 Score=13.45 Aligned_cols=19 Identities=32% Similarity=0.632 Sum_probs=12.2
Q ss_pred CCEEEEEEE-----EEECCHHHHH
Q ss_conf 001343123-----3431643663
Q 537021.9.peg.1 15 SQRIINASI-----FQFRGHTFIV 33 (41)
Q Consensus 15 sqriinasi-----fqfrghtfiv 33 (41)
.-|+||++. |.+.||.|.|
T Consensus 60 rlRliNa~~~~~~~~~i~gh~~~v 83 (169)
T 1hfu_A 60 RMRLISLSCDPNWQFSIDGHELTI 83 (169)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEE
T ss_pred EEEEECCCCCEEEEEEECCCCEEE
T ss_conf 998853777437899966872479
No 8
>>3fo3_A Eight-heme nitrite reductase; alpha protein, eight hemes C, oxidoreductase; HET: HEC PG6 PG4; 1.40A {Thioalkalivibrio nitratireducens} PDB: 3d1i_A* 3f29_A* 2zo5_A* 3gm6_A* 2ot4_A* (A:66-188)
Probab=5.12 E-value=3.1e+02 Score=12.72 Aligned_cols=17 Identities=24% Similarity=0.473 Sum_probs=10.9
Q ss_pred EECCHHHHHHHHHHCCC
Q ss_conf 43164366353554179
Q 537021.9.peg.1 25 QFRGHTFIVHHLLLNHR 41 (41)
Q Consensus 25 qfrghtfivhhlllnhr 41 (41)
.=|||.|.+...+-..|
T Consensus 50 epRGH~yal~D~~~t~R 66 (123)
T 3fo3_A 50 EPRSHAFMLVDHFVVDR 66 (123)
T ss_dssp CCCCGGGHHHHHHHSTT
T ss_pred CCCCCCCCCCCCCCCCC
T ss_conf 56777331567420578
No 9
>>2q9o_A Laccase-1; multicopper oxidase, 2- oxohistidine, oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} (A:161-335)
Probab=4.46 E-value=2.3e+02 Score=13.28 Aligned_cols=18 Identities=39% Similarity=0.547 Sum_probs=11.4
Q ss_pred CEEEEEEE-----EEECCHHHHH
Q ss_conf 01343123-----3431643663
Q 537021.9.peg.1 16 QRIINASI-----FQFRGHTFIV 33 (41)
Q Consensus 16 qriinasi-----fqfrghtfiv 33 (41)
-|+||++. |.+.||.|-|
T Consensus 67 lRliNa~~~~~~~l~i~gh~~~v 89 (175)
T 2q9o_A 67 LRILNTSTENHFQVSLVNHTMTV 89 (175)
T ss_dssp EEEEECCSSCCEEEEETTBCEEE
T ss_pred EEEEECCCCCEEEEEECCCCCCE
T ss_conf 87860477740476635544312
No 10
>>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A* (A:1-122)
Probab=3.99 E-value=2.7e+02 Score=12.96 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=24.3
Q ss_pred EEEECCCCCCCEEEEEEEEEECCHHHHHH
Q ss_conf 00101457100134312334316436635
Q 537021.9.peg.1 6 AVGFKGFNSSQRIINASIFQFRGHTFIVH 34 (41)
Q Consensus 6 avgfkgfnssqriinasifqfrghtfivh 34 (41)
...+.|..++++.-..++|-+.||.|+-.
T Consensus 44 d~~I~gisds~~a~~g~lff~dg~kyi~~ 72 (122)
T 2iu8_A 44 ATLLSGVEEIEEAKTAHITFLDNEKYAKH 72 (122)
T ss_dssp TCEECEECCTTTCCTTEEEECCSSSTHHH
T ss_pred CEEEECCCCHHHCCCCCEEEECCHHHHHH
T ss_conf 81895775966689984999778888999
Done!