Query         537021.9.peg.15_1
Match_columns 47
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 23785
Date          Sun May 22 15:06:46 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_15.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1bnx_A Protein (BAND 3); human  19.9      48   0.002   14.5   2.2   14    4-18      8-21  (34)
  2 2jkg_A Profilin; proline-rich    7.4 1.1E+02  0.0047   12.6   0.9   14   11-24    158-171 (179)
  3 3bz1_L Photosystem II reaction   5.8 1.5E+02  0.0064   11.9   1.0   11   31-41     26-36  (37)
  4 1nkz_B Light-harvesting protei   5.1 1.7E+02  0.0072   11.6   2.6   18   15-32     11-28  (41)
  5 2es9_A Putative cytoplasmic pr   4.7 1.5E+02  0.0061   12.0   0.2   13   14-26     94-106 (115)
  6 2f3y_B Voltage-dependent L-typ   4.0 2.1E+02  0.0088   11.2   1.6   14    7-20      4-17  (26)
  7 2o1k_A NS28, non-structural gl   3.2 2.5E+02   0.011   10.8   1.4   10    2-11     32-41  (52)
  8 2hac_A T-cell surface glycopro   2.4 3.2E+02   0.013   10.3   3.1   20    2-21      7-26  (33)
  9 1jb0_M Photosystem 1 reaction    2.1 3.6E+02   0.015   10.0   0.6    8   27-34     23-30  (31)
 10 2pbd_P Profilin-1, profilin I;   2.0 3.8E+02   0.016    9.9   1.1    8   15-22    130-137 (139)

No 1  
>1bnx_A Protein (BAND 3); human erythrocyte anion transporter, transmembrane, synthetic peptide, electron transport; NMR {Synthetic} SCOP: j.35.1.1
Probab=19.93  E-value=48  Score=14.48  Aligned_cols=14  Identities=50%  Similarity=0.944  Sum_probs=9.2

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             578999999999999
Q 537021.9.peg.1    4 DGIHDFLIFLYFAKY   18 (47)
Q Consensus         4 dgihdfliflyfaky   18 (47)
                      ..+.|+ ||+|||--
T Consensus         8 SD~~D~-iFiyfAcl   21 (34)
T 1bnx_A            8 SDITDV-IFIYFAAL   21 (34)
T ss_dssp             HHHHHH-HHHHHHHH
T ss_pred             HHHHHH-HHHHHHHH
T ss_conf             988899-99999985


No 2  
>2jkg_A Profilin; proline-rich ligand, protein-binding, malaria, profilin, cytoskeleton, actin filament; 1.89A {Plasmodium falciparum} PDB: 2jkf_A
Probab=7.41  E-value=1.1e+02  Score=12.60  Aligned_cols=14  Identities=50%  Similarity=0.503  Sum_probs=9.8

Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999988778
Q 537021.9.peg.1   11 IFLYFAKYLRESTR   24 (47)
Q Consensus        11 iflyfakylrestr   24 (47)
                      .-.-+|+||++|..
T Consensus       158 ~ve~LAdYL~~s~~  171 (179)
T 2jkg_A          158 AALTFAKELAESSQ  171 (179)
T ss_dssp             HHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             99999999987652


No 3  
>3bz1_L Photosystem II reaction center protein L; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz2_L* 3kzi_L*
Probab=5.84  E-value=1.5e+02  Score=11.89  Aligned_cols=11  Identities=64%  Similarity=0.932  Sum_probs=7.2

Q ss_pred             HHHHHHHCCHH
Q ss_conf             99999824612
Q 537021.9.peg.1   31 TLLYLFSSNFF   41 (47)
Q Consensus        31 tllylfssnff   41 (47)
                      .+--+|||-||
T Consensus        26 vlavlfssyff   36 (37)
T 3bz1_L           26 VLALLFSSYFF   36 (37)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHC
T ss_conf             99999888604


No 4  
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopin glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=5.08  E-value=1.7e+02  Score=11.63  Aligned_cols=18  Identities=39%  Similarity=0.709  Sum_probs=14.0

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             999998877899999999
Q 537021.9.peg.1   15 FAKYLRESTRAFFSLATL   32 (47)
Q Consensus        15 fakylrestraffslatl   32 (47)
                      .-||+-..||.|+..|-+
T Consensus        11 lHk~vidGtRvFg~iA~~   28 (41)
T 1nkz_B           11 LHKYVIDGTRVFLGLALV   28 (41)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCHHHHHHHHHH
T ss_conf             998740633789999999


No 5  
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Salmonella typhimurium LT2} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=4.73  E-value=1.5e+02  Score=12.01  Aligned_cols=13  Identities=31%  Similarity=0.904  Sum_probs=7.6

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999998877899
Q 537021.9.peg.1   14 YFAKYLRESTRAF   26 (47)
Q Consensus        14 yfakylrestraf   26 (47)
                      ||..|.+|.-||.
T Consensus        94 yFstYM~eeLkaL  106 (115)
T 2es9_A           94 YFSTYMQEQLKEL  106 (115)
T ss_dssp             GSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999999


No 6  
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=4.03  E-value=2.1e+02  Score=11.20  Aligned_cols=14  Identities=43%  Similarity=0.759  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999998
Q 537021.9.peg.1    7 HDFLIFLYFAKYLR   20 (47)
Q Consensus         7 hdfliflyfakylr   20 (47)
                      ..|||--||.|+-.
T Consensus         4 atfliqeyfrkfkk   17 (26)
T 2f3y_B            4 ATFLIQEYFRKFKK   17 (26)
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             58889999999998


No 7  
>2o1k_A NS28, non-structural glycoprotein NSP4; rotavirus enterotoxin, nonstructural protein, tetrameric coiled-coil, virulence, viral protein; 1.67A {Simian rotavirus A} PDB: 2o1j_A 1g1j_A* 1g1i_A*
Probab=3.23  E-value=2.5e+02  Score=10.80  Aligned_cols=10  Identities=50%  Similarity=0.471  Sum_probs=4.9

Q ss_pred             HHHHHHHHHH
Q ss_conf             3357899999
Q 537021.9.peg.1    2 LLDGIHDFLI   11 (47)
Q Consensus         2 lldgihdfli   11 (47)
                      ||..|||-||
T Consensus        32 lLkri~d~li   41 (52)
T 2o1k_A           32 LLKRIYDKLT   41 (52)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999871


No 8  
>2hac_A T-cell surface glycoprotein CD3 zeta chain; transmembrane, alpha helix, membrane protein; NMR {Homo sapiens}
Probab=2.40  E-value=3.2e+02  Score=10.27  Aligned_cols=20  Identities=40%  Similarity=0.439  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             33578999999999999988
Q 537021.9.peg.1    2 LLDGIHDFLIFLYFAKYLRE   21 (47)
Q Consensus         2 lldgihdfliflyfakylre   21 (47)
                      +||||-=..-..--|-|+|.
T Consensus         7 lLDGiLFiYgviiTaLf~r~   26 (33)
T 2hac_A            7 LLDGILFIYGVILTALFLRV   26 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHHHHHHH
T ss_conf             20308999999999999999


No 9  
>1jb0_M Photosystem 1 reaction centre subunit XII; membrane protein, multiprotein-pigment complex, photosynthesis; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.19.1
Probab=2.05  E-value=3.6e+02  Score=9.99  Aligned_cols=8  Identities=63%  Similarity=0.974  Sum_probs=0.0

Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q 537021.9.peg.1   27 FSLATLLY   34 (47)
Q Consensus        27 fslatlly   34 (47)
                      |.|+|-||
T Consensus        23 frl~tely   30 (31)
T 1jb0_M           23 FRLSTELY   30 (31)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHC
T ss_conf             99999860


No 10 
>2pbd_P Profilin-1, profilin I; ternary complex, profilin, actin, poly-proline, loading poly-Pro site, GAB domain, structural protein; HET: HIC ATP; 1.50A {Homo sapiens} SCOP: d.110.1.1 PDB: 1fik_A 1cjf_A 1pfl_A 1fil_A* 2pav_P* 3chw_P* 1awi_A 1cf0_A* 1pne_A 1hlu_P 2btf_P*
Probab=1.97  E-value=3.8e+02  Score=9.88  Aligned_cols=8  Identities=50%  Similarity=0.551  Sum_probs=0.0

Q ss_pred             HHHHHHHH
Q ss_conf             99999887
Q 537021.9.peg.1   15 FAKYLRES   22 (47)
Q Consensus        15 fakylres   22 (47)
                      +|+|||++
T Consensus       130 ladYL~~~  137 (139)
T 2pbd_P          130 MASHLRRS  137 (139)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
T ss_conf             99999874


Done!