RPS-BLAST 2.2.22 [Sep-27-2009]

Database: pdb70 
           24,244 sequences; 5,693,230 total letters

Searching..................................................done

Query= 537021.9.peg.15_1
         (47 letters)



>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
          acyl-carrier-protein, beta-ketoacyl reductase,
          beta-ketoacyl synthase, dehydratase; 4.00A
          {Saccharomyces cerevisiae}
          Length = 2006

 Score = 23.7 bits (51), Expect = 9.0
 Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 8/37 (21%)

Query: 15 FAKYLRESTRAFF------SLATLLYLFSSNFFLSDR 45
          F K L E T  F       + A L+  F    ++S  
Sbjct: 37 FNKILPEPTEGFAADDEPTTPAELVGKFLG--YVSSL 71


  Database: pdb70
    Posted date:  Jan 26, 2011 11:21 AM
  Number of letters in database: 5,693,230
  Number of sequences in database:  24,244
  
Lambda     K      H
   0.343    0.153    0.453 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 377,536
Number of extensions: 10143
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 47
Length of database: 5,693,230
Length adjustment: 20
Effective length of query: 27
Effective length of database: 5,208,350
Effective search space: 140625450
Effective search space used: 140625450
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 50 (23.4 bits)