Query 537021.9.peg.186_1
Match_columns 45
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Tue May 24 15:14:09 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_186.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1a1h_A QGSR zinc finger pepti 13.1 19 0.00057 18.6 -2.1 22 1-22 1-23 (30)
2 >1vcl_A Hemolytic lectin CEL-I 9.6 85 0.0025 15.4 0.3 14 26-39 4-17 (168)
3 >1zfd_A SWI5; DNA binding moti 9.5 29 0.00085 17.7 -2.1 22 2-23 1-23 (32)
4 >2epa_A Krueppel-like factor 1 8.2 41 0.0012 17.0 -1.8 22 2-23 7-29 (34)
5 >2ebt_A Krueppel-like factor 5 7.8 41 0.0012 16.9 -1.9 21 2-22 2-23 (30)
6 >3do9_A UPF0302 protein BA_154 7.2 1.3E+02 0.0039 14.5 0.4 21 13-33 6-26 (127)
7 >3dsm_A Uncharacterized protei 6.8 1.8E+02 0.0052 13.8 0.9 17 28-44 57-73 (96)
8 >2jp9_A Wilms tumor 1; DNA bin 6.2 59 0.0018 16.2 -1.8 21 2-22 2-23 (31)
9 >2ebt_A Krueppel-like factor 5 6.0 57 0.0017 16.3 -2.0 22 2-23 13-35 (41)
10 >3bua_E HSNM1B, DNA cross-LINK 5.9 1.7E+02 0.0051 13.9 0.4 17 16-32 1-17 (36)
No 1
>>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), zinc finger, DNA-binding protein; HET: DNA; 1.60A {Mus musculus} (A:1-30)
Probab=13.07 E-value=19 Score=18.59 Aligned_cols=22 Identities=45% Similarity=0.729 Sum_probs=16.0
Q ss_pred CCCCEEEHH-HHHHHHHHHHHHH
Q ss_conf 986546275-8899860336557
Q 537021.9.peg.1 1 MEAPYYVTF-CCKKVFSQSKRLF 22 (45)
Q Consensus 1 meapyyvtf-cckkvfsqskrlf 22 (45)
||-||.-++ -|.|-|+++..|-
T Consensus 1 ~EkPy~C~~~gC~k~F~~~~~L~ 23 (30)
T 1a1h_A 1 MERPYACPVESCDRRFSQSGSLT 23 (30)
T ss_dssp --CCEECCSSSCCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 98888199565889949766776
No 2
>>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} (A:1-149,A:414-432)
Probab=9.61 E-value=85 Score=15.39 Aligned_cols=14 Identities=50% Similarity=0.819 Sum_probs=11.1
Q ss_pred HCCCCCCCCCEEEE
Q ss_conf 33800201120123
Q 537021.9.peg.1 26 FLNPVDINGMRSFV 39 (45)
Q Consensus 26 flnpvdingmrsfv 39 (45)
-.||.||..+|||-
T Consensus 4 ctnpldigelrsfk 17 (168)
T 1vcl_A 4 CTNPLDIGELRSFK 17 (168)
T ss_dssp CCSEEEEECEEETT
T ss_pred CCCCCCCEEEEECC
T ss_conf 24875010589888
No 3
>>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} (A:)
Probab=9.52 E-value=29 Score=17.73 Aligned_cols=22 Identities=27% Similarity=0.611 Sum_probs=15.4
Q ss_pred CCCEEEHH-HHHHHHHHHHHHHH
Q ss_conf 86546275-88998603365578
Q 537021.9.peg.1 2 EAPYYVTF-CCKKVFSQSKRLFL 23 (45)
Q Consensus 2 eapyyvtf-cckkvfsqskrlfl 23 (45)
|-||.-++ -|.|.|+++..|--
T Consensus 1 EkP~~C~~~gC~K~F~~~~~L~~ 23 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVRNHDLIR 23 (32)
T ss_dssp CCSBCCCCTTCCCCBSSSHHHHH
T ss_pred CCCEECCCCCCCCEECCHHHHHH
T ss_conf 94826959998986487778899
No 4
>>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} (A:39-72)
Probab=8.18 E-value=41 Score=16.96 Aligned_cols=22 Identities=27% Similarity=0.640 Sum_probs=16.0
Q ss_pred CCCEEEHH-HHHHHHHHHHHHHH
Q ss_conf 86546275-88998603365578
Q 537021.9.peg.1 2 EAPYYVTF-CCKKVFSQSKRLFL 23 (45)
Q Consensus 2 eapyyvtf-cckkvfsqskrlfl 23 (45)
|-||--++ -|.|-|+|+..|-.
T Consensus 7 ekPy~C~~~~C~k~F~~~~~L~~ 29 (34)
T 2epa_A 7 EKPFSCSWKGCERRFARSDELSR 29 (34)
T ss_dssp SCSEECCCTTCCCEESSHHHHHH
T ss_pred CCCCCCCCCCCCCEEECHHHHHH
T ss_conf 20134301588988748999998
No 5
>>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} (A:42-71)
Probab=7.76 E-value=41 Score=16.94 Aligned_cols=21 Identities=38% Similarity=0.661 Sum_probs=15.1
Q ss_pred CCCEEEHH-HHHHHHHHHHHHH
Q ss_conf 86546275-8899860336557
Q 537021.9.peg.1 2 EAPYYVTF-CCKKVFSQSKRLF 22 (45)
Q Consensus 2 eapyyvtf-cckkvfsqskrlf 22 (45)
|-||.-.+ -|.|-|+++..|-
T Consensus 2 ekPf~C~~~gC~K~F~~~~~L~ 23 (30)
T 2ebt_A 2 EKPYKCTWEGCDWRFARSDELT 23 (30)
T ss_dssp CCCEECCSSSCCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHH
T ss_conf 8664232356642010266654
No 6
>>3do9_A UPF0302 protein BA_1542/GBAA1542/BAS1430; uncharacterized protein, structural genomics, protein structure initiative, PSI; 2.75A {Bacillus anthracis} (A:1-127)
Probab=7.17 E-value=1.3e+02 Score=14.46 Aligned_cols=21 Identities=29% Similarity=0.520 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCC
Q ss_conf 986033655786333800201
Q 537021.9.peg.1 13 KVFSQSKRLFLEFFLNPVDIN 33 (45)
Q Consensus 13 kvfsqskrlflefflnpvdin 33 (45)
+|-.+.|+-|+++||+-....
T Consensus 6 ~vsv~~Kk~Fi~wfL~~y~lK 26 (127)
T 3do9_A 6 PVSVNEKKDFVKWFLNNYQLK 26 (127)
T ss_dssp CCCHHHHHHHHHHHHHHCCBS
T ss_pred CCCHHHHHHHHHHHHHHCCCC
T ss_conf 567899999999999855543
No 7
>>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, protein structure initiative; 1.90A {Bacteroides uniformis atcc 8492} (A:172-267)
Probab=6.81 E-value=1.8e+02 Score=13.81 Aligned_cols=17 Identities=41% Similarity=0.974 Sum_probs=14.4
Q ss_pred CCCCCCCCEEEEEEEEC
Q ss_conf 80020112012301224
Q 537021.9.peg.1 28 NPVDINGMRSFVFWITN 44 (45)
Q Consensus 28 npvdingmrsfvfwitn 44 (45)
..|.+||-|.-.+||.+
T Consensus 57 sevqlng~rd~lywink 73 (96)
T 3dsm_A 57 SEVQLNGTRDTLYWINN 73 (96)
T ss_dssp EEEEECTTSCEEEEESS
T ss_pred EEEEECCCCCEEEEECC
T ss_conf 18999488999999959
No 8
>>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* (A:33-63)
Probab=6.17 E-value=59 Score=16.16 Aligned_cols=21 Identities=43% Similarity=0.789 Sum_probs=14.7
Q ss_pred CCCEEEHH-HHHHHHHHHHHHH
Q ss_conf 86546275-8899860336557
Q 537021.9.peg.1 2 EAPYYVTF-CCKKVFSQSKRLF 22 (45)
Q Consensus 2 eapyyvtf-cckkvfsqskrlf 22 (45)
|-||.-.+ -|.|-|+++..|-
T Consensus 2 ekPy~C~~~~CgK~F~~~~~L~ 23 (31)
T 2jp9_A 2 EKPYQCDFKDCERRFSRSDQLK 23 (31)
T ss_dssp TCCEECCSTTCCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 5200111111111111221112
No 9
>>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} (A:1-41)
Probab=6.00 E-value=57 Score=16.26 Aligned_cols=22 Identities=27% Similarity=0.525 Sum_probs=15.0
Q ss_pred CCCEEEHH-HHHHHHHHHHHHHH
Q ss_conf 86546275-88998603365578
Q 537021.9.peg.1 2 EAPYYVTF-CCKKVFSQSKRLFL 23 (45)
Q Consensus 2 eapyyvtf-cckkvfsqskrlfl 23 (45)
|-||.-.. -|.|.|+|+-.|..
T Consensus 13 ekpy~C~~~~C~K~F~~~s~L~~ 35 (41)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKA 35 (41)
T ss_dssp CCCEECCSSSCCCEESCHHHHHH
T ss_pred CCCEECCCCCCCCEECCHHHCCC
T ss_conf 78977888889978488888887
No 10
>>3bua_E HSNM1B, DNA cross-LINK repair 1B protein; TRF2 TRFH domain dimerization domain apollo peptide, alternative splicing, cell cycle; HET: DNA; 2.50A {Homo sapiens} (E:)
Probab=5.87 E-value=1.7e+02 Score=13.87 Aligned_cols=17 Identities=35% Similarity=0.696 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHCCCCCC
Q ss_conf 03365578633380020
Q 537021.9.peg.1 16 SQSKRLFLEFFLNPVDI 32 (45)
Q Consensus 16 sqskrlflefflnpvdi 32 (45)
|.+..|-|++.|.||+.
T Consensus 1 ~e~rglalkylltpv~f 17 (36)
T 3bua_E 1 SEFRGLALKYLLTPVNF 17 (36)
T ss_pred CCCCHHHHHHHHCHHHH
T ss_conf 96101639998052899
Done!