Query 537021.9.peg.191_1 Match_columns 44 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Tue May 24 17:05:43 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_191.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1nvma1 a.5.7.1 (A:291-341) 4- 10.6 61 0.0045 13.8 2.8 33 6-38 1-33 (51) 2 d1k8ke_ a.148.1.1 (E:) Arp2/3 4.1 1.4E+02 0.01 12.0 1.7 37 2-38 40-78 (174) 3 d2e74d2 f.23.12.1 (D:12-45) IS 3.4 1.6E+02 0.012 11.7 1.4 12 7-18 5-16 (34) 4 d1wjpa2 g.37.1.1 (A:43-66) Zin 3.4 1.5E+02 0.011 11.9 0.6 11 3-13 8-18 (26) 5 d1q90m_ f.23.25.1 (M:) PetM su 3.1 1.8E+02 0.013 11.5 1.4 13 10-22 17-29 (34) 6 d2bgca2 b.82.3.3 (A:7-137) Lis 2.2 43 0.0031 14.5 -3.4 17 25-41 19-35 (131) 7 d1p2za1 b.121.2.2 (A:5-650) Ad 2.2 1.3E+02 0.0093 12.2 -0.9 20 13-32 375-394 (646) 8 d1b8wa_ g.9.1.1 (A:) Defensin- 1.9 1.4E+02 0.01 12.0 -1.0 7 21-27 21-27 (42) 9 d1utaa_ d.58.52.1 (A:) Cell di 1.8 1.3E+02 0.0096 12.1 -1.4 8 32-40 6-13 (77) 10 d1xsza2 d.129.9.1 (A:198-354) 1.7 2.6E+02 0.019 10.6 -0.0 14 28-41 85-98 (157) No 1 >d1nvma1 a.5.7.1 (A:291-341) 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain {Pseudomonas sp. [TaxId: 306]} Probab=10.65 E-value=61 Score=13.78 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=21.2 Q ss_pred HHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH Q ss_conf 147999995337664231577788888696201 Q 537021.9.peg.1 6 FSPFLKLLSFGFVLLSINCRDIIFSIWYIQEVG 38 (44) Q Consensus 6 fspflkllsfgfvllsincrdiifsiwyiqevg 38 (44) ||.||+--.-.---..++.|||.+..---+-|| T Consensus 1 ySsFl~ha~raa~~ygv~~rdil~ElGrR~~Vg 33 (51) T d1nvma1 1 YSSFLRHAEIAAAKYNLKTLDILVELGHRRMVG 33 (51) T ss_dssp CTTHHHHHHHHHHHHTCCHHHHHHHHHHHTCCT T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC T ss_conf 943889999999992989999999971135536 No 2 >d1k8ke_ a.148.1.1 (E:) Arp2/3 complex 21 kDa subunit ARPC3 {Cow (Bos taurus) [TaxId: 9913]} Probab=4.09 E-value=1.4e+02 Score=12.00 Aligned_cols=37 Identities=27% Similarity=0.355 Sum_probs=20.4 Q ss_pred CCCHHHHHHHHHHH--HHHHHEEEHHHHHHHHHHHHHHH Q ss_conf 21011479999953--37664231577788888696201 Q 537021.9.peg.1 2 IVREFSPFLKLLSF--GFVLLSINCRDIIFSIWYIQEVG 38 (44) Q Consensus 2 ivrefspflkllsf--gfvllsincrdiifsiwyiqevg 38 (44) ||-|---|.|.-+| .|-.-+-.-|-+|+-++||.|.= T Consensus 40 IIDEal~~FraN~fFrnfeik~~aDR~LIYltlyiseCL 78 (174) T d1k8ke_ 40 IVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECL 78 (174) T ss_dssp HHHHHHHHHHHHTTCSCCCCCSHHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH T ss_conf 799999998765776326457863146623699999999 No 3 >d2e74d2 f.23.12.1 (D:12-45) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Mastigocladus laminosus [TaxId: 83541]} Probab=3.43 E-value=1.6e+02 Score=11.68 Aligned_cols=12 Identities=50% Similarity=0.946 Sum_probs=9.0 Q ss_pred HHHHHHHHHHHH Q ss_conf 479999953376 Q 537021.9.peg.1 7 SPFLKLLSFGFV 18 (44) Q Consensus 7 spflkllsfgfv 18 (44) ..|+.||.||-+ T Consensus 5 rqfmnlltfgt~ 16 (34) T d2e74d2 5 RQFMNLLAFGTV 16 (34) T ss_dssp HHHHHHHHHHHH T ss_pred HHHHHHHHHHHH T ss_conf 898889987448 No 4 >d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]} Probab=3.40 E-value=1.5e+02 Score=11.92 Aligned_cols=11 Identities=55% Similarity=0.555 Sum_probs=7.6 Q ss_pred CCHHHHHHHHH Q ss_conf 10114799999 Q 537021.9.peg.1 3 VREFSPFLKLL 13 (44) Q Consensus 3 vrefspflkll 13 (44) .|-|||-||-- T Consensus 8 lrf~sp~lk~e 18 (26) T d1wjpa2 8 LRFFSPELKQE 18 (26) T ss_dssp CCBSSHHHHHH T ss_pred EEECCHHHHHH T ss_conf 24379778567 No 5 >d1q90m_ f.23.25.1 (M:) PetM subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]} Probab=3.09 E-value=1.8e+02 Score=11.50 Aligned_cols=13 Identities=54% Similarity=0.818 Sum_probs=8.5 Q ss_pred HHHHHHHHHHHEE Q ss_conf 9999533766423 Q 537021.9.peg.1 10 LKLLSFGFVLLSI 22 (44) Q Consensus 10 lkllsfgfvllsi 22 (44) |--|..|||||.. T Consensus 17 l~glaigfvllrv 29 (34) T d1q90m_ 17 LVGLAIGFVLLRV 29 (34) T ss_dssp HHHHHHHHHHHHH T ss_pred HHHHHHHHHHEEE T ss_conf 9999887750020 No 6 >d2bgca2 b.82.3.3 (A:7-137) Listeriolysin regulatory protein PrfA, N-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]} Probab=2.17 E-value=43 Score=14.53 Aligned_cols=17 Identities=35% Similarity=0.769 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHHHHHEE Q ss_conf 77788888696201002 Q 537021.9.peg.1 25 RDIIFSIWYIQEVGAFI 41 (44) Q Consensus 25 rdiifsiwyiqevgafi 41 (44) .|+||+-|--||--.|. T Consensus 19 ke~ifnqwdp~eycifl 35 (131) T d2bgca2 19 KELIFNQWDPQEYCIFL 35 (131) T ss_dssp TCEEECTTCCCCEEEEE T ss_pred HHEEECCCCCCEEEEEE T ss_conf 01355256864057760 No 7 >d1p2za1 b.121.2.2 (A:5-650) Adenovirus hexon {Human adenovirus type 2 [TaxId: 10515]} Probab=2.17 E-value=1.3e+02 Score=12.22 Aligned_cols=20 Identities=45% Similarity=0.750 Sum_probs=0.0 Q ss_pred HHHHHHHHEEEHHHHHHHHH Q ss_conf 95337664231577788888 Q 537021.9.peg.1 13 LSFGFVLLSINCRDIIFSIW 32 (44) Q Consensus 13 lsfgfvllsincrdiifsiw 32 (44) ||+-+.|-|+--|.--||+| T Consensus 375 LSYQylLa~l~dR~rYFsmW 394 (646) T d1p2za1 375 LSYQLLLDSIGDRTRYFSMW 394 (646) T ss_dssp HHHHHHHHHHSCTTSCBGGG T ss_pred HHHHHHHHHHCCCHHHHHHH T ss_conf 99999988643303445564 No 8 >d1b8wa_ g.9.1.1 (A:) Defensin-like peptide, DLP {Duckbilled platypus (Ornithorhynchus anatinus), DLP-1 [TaxId: 9258]} Probab=1.94 E-value=1.4e+02 Score=12.03 Aligned_cols=7 Identities=57% Similarity=1.488 Sum_probs=0.0 Q ss_pred EEEHHHH Q ss_conf 2315777 Q 537021.9.peg.1 21 SINCRDI 27 (44) Q Consensus 21 sincrdi 27 (44) ..|||.| T Consensus 21 tvncrei 27 (42) T d1b8wa_ 21 TVNCREI 27 (42) T ss_dssp CSSSCBC T ss_pred CCCHHHH T ss_conf 5337999 No 9 >d1utaa_ d.58.52.1 (A:) Cell division protein FtsN {Escherichia coli [TaxId: 562]} Probab=1.78 E-value=1.3e+02 Score=12.14 Aligned_cols=8 Identities=50% Similarity=1.435 Sum_probs=0.0 Q ss_pred HHHHHHHHE Q ss_conf 869620100 Q 537021.9.peg.1 32 WYIQEVGAF 40 (44) Q Consensus 32 wyiqevgaf 40 (44) |+|| +||| T Consensus 6 y~vQ-vGaF 13 (77) T d1utaa_ 6 WMVQ-CGSF 13 (77) T ss_dssp CCCB-CCEE T ss_pred EEEE-EEEE T ss_conf 9999-9992 No 10 >d1xsza2 d.129.9.1 (A:198-354) RalF, C-terminal domain {Legionella pneumophila [TaxId: 446]} Probab=1.67 E-value=2.6e+02 Score=10.65 Aligned_cols=14 Identities=43% Similarity=0.698 Sum_probs=0.0 Q ss_pred HHHHHHHHHHHHEE Q ss_conf 88888696201002 Q 537021.9.peg.1 28 IFSIWYIQEVGAFI 41 (44) Q Consensus 28 ifsiwyiqevgafi 41 (44) |||-|+..|-...| T Consensus 85 ifSkWf~GEkskii 98 (157) T d1xsza2 85 IFSKWLFGEQPRVI 98 (157) T ss_dssp TTTHHHHCSSCEEE T ss_pred HHHHHHCCCCCEEE T ss_conf 77787617887388 Done!