RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= 537021.9.peg.224_1 (38 letters) >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Score = 30.0 bits (66), Expect = 0.12 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 7/33 (21%) Query: 7 EKIGIKTLEKAIK-YETIRACFP-LATGYLEST 37 EK +K L+ ++K Y A P LA +++T Sbjct: 18 EKQALKKLQASLKLYADDSA--PALA---IKAT 45 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.319 0.134 0.378 Gapped Lambda K H 0.267 0.0574 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 300,216 Number of extensions: 7101 Number of successful extensions: 41 Number of sequences better than 10.0: 1 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 4 Length of query: 38 Length of database: 5,693,230 Length adjustment: 12 Effective length of query: 26 Effective length of database: 5,402,302 Effective search space: 140459852 Effective search space used: 140459852 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 50 (23.4 bits)