Query 537021.9.peg.227_1
Match_columns 37
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 16:03:37 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_227.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w6ga1 b.30.2.1 (A:212-628) C 48.4 9.9 0.00072 17.8 3.8 26 3-28 31-56 (417)
2 d1w2za1 b.30.2.1 (A:207-647) C 45.3 7.8 0.00057 18.4 2.9 23 3-25 36-58 (441)
3 d1w7ca1 b.30.2.1 (A:316-775) L 42.0 13 0.00094 17.2 3.8 28 3-32 31-58 (460)
4 d1d6za1 b.30.2.1 (A:301-724) C 37.8 12 0.00087 17.4 2.9 24 3-26 27-50 (424)
5 d2oqea1 b.30.2.1 (A:237-672) C 35.9 13 0.00097 17.2 2.9 23 3-25 27-49 (436)
6 d2i9xa1 d.366.1.1 (A:1-84) Put 14.6 26 0.0019 15.6 1.0 11 5-15 42-52 (84)
7 d2ia9a1 d.366.1.1 (A:1-92) Put 13.0 31 0.0023 15.3 1.0 11 5-15 42-52 (92)
8 d1yuaa1 g.41.3.3 (A:1-65) Prok 10.0 64 0.0047 13.6 1.9 20 6-25 26-45 (65)
9 d1wd3a2 b.42.8.1 (A:338-499) A 7.0 78 0.0057 13.2 1.2 18 7-24 64-83 (162)
10 d1l6pa_ b.1.17.1 (A:) Thiol:di 6.3 96 0.007 12.7 2.2 19 6-24 26-44 (121)
No 1
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]}
Probab=48.38 E-value=9.9 Score=17.84 Aligned_cols=26 Identities=31% Similarity=0.653 Sum_probs=22.1
Q ss_pred EEEEEEEECCCCEEEEEECCCCCCCC
Q ss_conf 47899997354139998336301233
Q 537021.9.peg.2 3 TWGLYVSFSSRKGIFLYQNNFYTQEK 28 (37)
Q Consensus 3 twglyvsfssrkgiflyqnnfytqek 28 (37)
-|.++++|..|.|+-|++-.|.-.|+
T Consensus 31 ~W~f~~~f~~r~Gl~l~dv~~~~g~r 56 (417)
T d1w6ga1 31 KWSLDVGFDVREGVVLHNIAFRDGDR 56 (417)
T ss_dssp TEEEEEEEETTTEEEEEEEEEEETTE
T ss_pred CCEEEEEECCCCCCEEEEEEECCCCE
T ss_conf 87899970787661999999818984
No 2
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]}
Probab=45.28 E-value=7.8 Score=18.37 Aligned_cols=23 Identities=26% Similarity=0.683 Sum_probs=20.6
Q ss_pred EEEEEEEECCCCEEEEEECCCCC
Q ss_conf 47899997354139998336301
Q 537021.9.peg.2 3 TWGLYVSFSSRKGIFLYQNNFYT 25 (37)
Q Consensus 3 twglyvsfssrkgiflyqnnfyt 25 (37)
-|.++++|..|.|+-|++-.+|.
T Consensus 36 ~W~f~v~f~~r~GlvL~~v~~~D 58 (441)
T d1w2za1 36 NWKFHIGFDVRAGIVISLASIYD 58 (441)
T ss_dssp TEEEEEEEETTTEEEEEEEEEEE
T ss_pred CCEEEEEECCCCCCEEEEEEEEE
T ss_conf 97799970688752477667762
No 3
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]}
Probab=42.03 E-value=13 Score=17.24 Aligned_cols=28 Identities=36% Similarity=0.845 Sum_probs=21.9
Q ss_pred EEEEEEEECCCCEEEEEECCCCCCCCEEEE
Q ss_conf 478999973541399983363012330799
Q 537021.9.peg.2 3 TWGLYVSFSSRKGIFLYQNNFYTQEKEVCY 32 (37)
Q Consensus 3 twglyvsfssrkgiflyqnnfytqekevcy 32 (37)
-|.++++|..|.|+-||+-.|- ...|-|
T Consensus 31 ~W~f~vgf~~reGlvL~dv~~~--gr~i~Y 58 (460)
T d1w7ca1 31 DWGFYTSWSRDTGISFYDITFK--GERIVY 58 (460)
T ss_dssp TEEEEEEEETTTEEEEEEEEET--TEEEEE
T ss_pred CCEEEEECCCCCCCEEEEEEEC--CEEEEE
T ss_conf 9789996588877189866599--988899
No 4
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=37.80 E-value=12 Score=17.41 Aligned_cols=24 Identities=21% Similarity=0.494 Sum_probs=20.8
Q ss_pred EEEEEEEECCCCEEEEEECCCCCC
Q ss_conf 478999973541399983363012
Q 537021.9.peg.2 3 TWGLYVSFSSRKGIFLYQNNFYTQ 26 (37)
Q Consensus 3 twglyvsfssrkgiflyqnnfytq 26 (37)
-|.++++|.+|.|+-|++-.|--+
T Consensus 27 ~W~f~~~f~~r~Gl~L~dv~y~~~ 50 (424)
T d1d6za1 27 NWDFHLSMNSRVGPMISTVTYNDN 50 (424)
T ss_dssp TEEEEEEEETTTEEEEEEEEEEET
T ss_pred CCEEEEECCCCCCCEEEEEEEECC
T ss_conf 978999717887748988899189
No 5
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]}
Probab=35.89 E-value=13 Score=17.16 Aligned_cols=23 Identities=22% Similarity=0.498 Sum_probs=20.2
Q ss_pred EEEEEEEECCCCEEEEEECCCCC
Q ss_conf 47899997354139998336301
Q 537021.9.peg.2 3 TWGLYVSFSSRKGIFLYQNNFYT 25 (37)
Q Consensus 3 twglyvsfssrkgiflyqnnfyt 25 (37)
-|.++++|.+|.|+-|++-.|--
T Consensus 27 ~W~f~~~~~~r~Gl~L~dv~~~~ 49 (436)
T d2oqea1 27 NFKFHIGFNYREGIVLSDVSYND 49 (436)
T ss_dssp TEEEEEEEETTTEEEEEEEEEEE
T ss_pred CCEEEEEECCCCCCEEEEEEEEC
T ss_conf 97899971798661899789918
No 6
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=14.56 E-value=26 Score=15.62 Aligned_cols=11 Identities=36% Similarity=0.869 Sum_probs=8.8
Q ss_pred EEEEEECCCCE
Q ss_conf 89999735413
Q 537021.9.peg.2 5 GLYVSFSSRKG 15 (37)
Q Consensus 5 glyvsfssrkg 15 (37)
||+|++.|||.
T Consensus 42 GlFVamPs~k~ 52 (84)
T d2i9xa1 42 GLFVAMPSKRT 52 (84)
T ss_dssp EEEEECCEEEC
T ss_pred CCEEECCCCCC
T ss_conf 76998977499
No 7
>d2ia9a1 d.366.1.1 (A:1-92) Putative septation protein SpoVG {Bacillus subtilis [TaxId: 1423]}
Probab=13.01 E-value=31 Score=15.25 Aligned_cols=11 Identities=36% Similarity=0.869 Sum_probs=8.5
Q ss_pred EEEEEECCCCE
Q ss_conf 89999735413
Q 537021.9.peg.2 5 GLYVSFSSRKG 15 (37)
Q Consensus 5 glyvsfssrkg 15 (37)
||+|++.|||.
T Consensus 42 GlFVaMPs~k~ 52 (92)
T d2ia9a1 42 GLFVAMPSKRT 52 (92)
T ss_dssp EEEEECCEEEC
T ss_pred CCEEECCCCCC
T ss_conf 75998977599
No 8
>d1yuaa1 g.41.3.3 (A:1-65) Prokaryotic DNA topoisomerase I, a C-terminal fragment {Escherichia coli [TaxId: 562]}
Probab=9.96 E-value=64 Score=13.60 Aligned_cols=20 Identities=30% Similarity=0.496 Sum_probs=16.6
Q ss_pred EEEEECCCCEEEEEECCCCC
Q ss_conf 99997354139998336301
Q 537021.9.peg.2 6 LYVSFSSRKGIFLYQNNFYT 25 (37)
Q Consensus 6 lyvsfssrkgiflyqnnfyt 25 (37)
.||--.+-+|+||-.++|-.
T Consensus 26 ~yvLRDga~GlFlAAs~FPK 45 (65)
T d1yuaa1 26 YFVLRDGAAGVFLAANTFPK 45 (65)
T ss_dssp EEEEECCSSSCEEEETTTTS
T ss_pred EEEEECCCCCEEEECCCCCC
T ss_conf 78851665414532034887
No 9
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]}
Probab=6.98 E-value=78 Score=13.18 Aligned_cols=18 Identities=33% Similarity=0.528 Sum_probs=13.6
Q ss_pred EEEECCCC--EEEEEECCCC
Q ss_conf 99973541--3999833630
Q 537021.9.peg.2 7 YVSFSSRK--GIFLYQNNFY 24 (37)
Q Consensus 7 yvsfssrk--giflyqnnfy 24 (37)
+|||.|+. |.||-+.||-
T Consensus 64 ~vSfES~n~Pg~yLRH~n~~ 83 (162)
T d1wd3a2 64 CFSFESVDTPGSYIRHYNFE 83 (162)
T ss_dssp SEEEEESSSTTEEEEEETTE
T ss_pred EEEEEECCCCCCEEEEECCE
T ss_conf 69898767898689997899
No 10
>d1l6pa_ b.1.17.1 (A:) Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) {Escherichia coli [TaxId: 562]}
Probab=6.33 E-value=96 Score=12.70 Aligned_cols=19 Identities=21% Similarity=0.634 Sum_probs=13.2
Q ss_pred EEEEECCCCEEEEEECCCC
Q ss_conf 9999735413999833630
Q 537021.9.peg.2 6 LYVSFSSRKGIFLYQNNFY 24 (37)
Q Consensus 6 lyvsfssrkgiflyqnnfy 24 (37)
+.++|.-..|.+||++.|-
T Consensus 26 l~i~w~Ia~gyYLY~dki~ 44 (121)
T d1l6pa_ 26 LNLTWQIKDGYYLYRKQIR 44 (121)
T ss_dssp EEEEEEECTTEEEEGGGCE
T ss_pred EEEEEEECCCEEEEEEEEE
T ss_conf 9999996898088676899
Done!