BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 537021.9.peg.248_1 (45 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >537021.9.peg.248_1 Length = 45 Score = 87.0 bits (214), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 45/45 (100%), Positives = 45/45 (100%) Query: 1 LSINFLQAGSLVATGFLEKIFVGNFLDSLSFPCFIGISCGACIFF 45 LSINFLQAGSLVATGFLEKIFVGNFLDSLSFPCFIGISCGACIFF Sbjct: 1 LSINFLQAGSLVATGFLEKIFVGNFLDSLSFPCFIGISCGACIFF 45 >gi|254780512|ref|YP_003064925.1| flagellar biosynthesis protein FlhA [Candidatus Liberibacter asiaticus str. psy62] Length = 692 Score = 23.9 bits (50), Expect = 0.60, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 17/37 (45%) Query: 9 GSLVATGFLEKIFVGNFLDSLSFPCFIGISCGACIFF 45 G L TG L + +GN D + + S G C+ F Sbjct: 584 GDLAPTGILNILKLGNHWDMIFYQAIQRDSKGECVDF 620 >gi|254780392|ref|YP_003064805.1| leucyl aminopeptidase [Candidatus Liberibacter asiaticus str. psy62] Length = 494 Score = 21.6 bits (44), Expect = 2.9, Method: Composition-based stats. Identities = 9/12 (75%), Positives = 10/12 (83%) Query: 8 AGSLVATGFLEK 19 AGS+VA FLEK Sbjct: 436 AGSIVAAQFLEK 447 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.337 0.152 0.487 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,684 Number of Sequences: 1233 Number of extensions: 712 Number of successful extensions: 5 Number of sequences better than 100.0: 4 Number of HSP's better than 100.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1 Number of HSP's gapped (non-prelim): 4 length of query: 45 length of database: 328,796 effective HSP length: 18 effective length of query: 27 effective length of database: 306,602 effective search space: 8278254 effective search space used: 8278254 T: 11 A: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.7 bits) S2: 31 (16.5 bits)