HHsearch alignment of GI: peg_33 and MMDB domain: 1u8s_A_1-86

>1u8s_A (A:1-86) Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae}

Probab=97.71  E-value=4e-05  Score=47.54  Aligned_cols=63  Identities=24%  Similarity=0.246  Sum_probs=48.9

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC--CHHHHHHHHCC
Q ss_conf             983999998287866889998997369963227742147898189999947889--98999998649
Q 537021.9.peg.3   22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI--LNSVLEKLSVN   86 (100)
Q Consensus        22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i--~~~vl~~i~~~   86 (100)
                      +...|.+.-.|+||+++.|++.|+++|+||.......  .++.-.|.+.++.+.  .+++.++++.+
T Consensus         5 ~~~vitv~g~DrpGiva~is~~la~~g~nI~~~~~~~--~~~~f~~~~~~~~~~~~~~~l~~~l~~~   69 (86)
T 1u8s_A            5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM--FGKEFTLLMLISGSPSNITRVETTLPLL   69 (86)
T ss_dssp             EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTEEEEEEEEEECHHHHHHHHHHHHHH
T ss_pred             EEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEE--ECCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf             1899999926988599999999998799599858899--8796299998505845667899999998