HHsearch alignment of GI: peg_33 and MMDB domain: 1u8s_A_87-192
>1u8s_A (A:87-192) Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae}
Probab=97.80 E-value=0.00014 Score=44.67 Aligned_cols=65 Identities=9% Similarity=0.077 Sum_probs=46.5
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCC------CCEEEEEEEEC--CCCC-HHHHHHHHCC
Q ss_conf 9839999982878668899989973699632277421478------98189999947--8899-8999998649
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS------TEHAISFLCID--GSIL-NSVLEKLSVN 86 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~------g~~A~~ii~vD--~~i~-~~vl~~i~~~ 86 (100)
....+.+.-.|+||++++|+++|+++|+||..++...... .+...|.+.++ ...+ +++.+++.++
T Consensus 6 ~~~~i~v~g~DrpGiva~it~~la~~~~nI~~l~~~~~~~~~~~~~~~~f~m~~~~~~p~~~~~~~l~~~l~~l 79 (106)
T 1u8s_A 6 YTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDAL 79 (106)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHH
T ss_pred EEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 16999998447068999999999977996668999953677666778579999999759999999999999999