Query 537021.9.peg.330_1
Match_columns 43
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Tue May 24 19:08:42 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_330.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1un2a_ c.47.1.13 (A:) Disulfi 9.4 32 0.0023 15.8 0.1 21 16-36 113-133 (195)
2 d1jvaa3 d.95.2.2 (A:582-698) V 6.6 1E+02 0.0076 13.3 1.9 16 16-32 1-16 (117)
3 d2au5a1 a.244.1.1 (A:1-132) Hy 5.3 1E+02 0.0074 13.4 1.0 11 25-35 119-129 (132)
4 d1tfra1 a.60.7.1 (A:183-305) T 5.1 47 0.0034 15.0 -0.9 12 14-25 12-25 (123)
5 d1fvka_ c.47.1.13 (A:) Disulfi 3.4 1.6E+02 0.012 12.4 0.9 26 7-32 5-34 (188)
6 d1lpba2 g.3.10.1 (A:45-90) (Pr 3.0 1.9E+02 0.014 12.1 0.8 12 11-22 22-33 (46)
7 d2c1wa1 d.294.1.1 (A:6-289) En 3.0 2E+02 0.015 12.0 1.0 20 16-36 217-236 (284)
8 d1xuba1 d.21.1.2 (A:1-128) Phe 2.9 2.1E+02 0.015 11.9 1.2 26 2-27 103-128 (128)
9 d1b33n_ d.30.1.1 (N:) Allophyc 2.6 1.7E+02 0.012 12.4 0.1 14 3-16 42-55 (67)
10 d1ra0a1 b.92.1.2 (A:4-55,A:376 2.5 2.4E+02 0.017 11.7 1.0 25 7-32 38-62 (103)
No 1
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]}
Probab=9.41 E-value=32 Score=15.77 Aligned_cols=21 Identities=29% Similarity=0.648 Sum_probs=14.8
Q ss_pred CCCCCHHHHHCCCCHHHHHHH
Q ss_conf 776540332137556899998
Q 537021.9.peg.3 16 GDKSIPSFFSFGCSDEFILKS 36 (43)
Q Consensus 16 gdksipsffsfgcsdefilks 36 (43)
+..++-.||||+|.--+-...
T Consensus 113 ~~~~VvEffsy~Cp~C~~~e~ 133 (195)
T d1un2a_ 113 GAPQVLEFFSFFCPHCYQFEE 133 (195)
T ss_dssp TCCSEEEEECTTCHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCCH
T ss_conf 996699998169922001124
No 2
>d1jvaa3 d.95.2.2 (A:582-698) VMA1-derived endonuclease (VDE) PI-SceI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.59 E-value=1e+02 Score=13.33 Aligned_cols=16 Identities=44% Similarity=0.449 Sum_probs=7.7
Q ss_pred CCCCCHHHHHCCCCHHH
Q ss_conf 77654033213755689
Q 537021.9.peg.3 16 GDKSIPSFFSFGCSDEF 32 (43)
Q Consensus 16 gdksipsffsfgcsdef 32 (43)
|+|.||+++.- .+.|.
T Consensus 1 g~K~IP~~i~~-~~~~~ 16 (117)
T d1jvaa3 1 GVKNIPSFLST-DNIGT 16 (117)
T ss_dssp TEECCCGGGGG-SCHHH
T ss_pred CCCCCCHHHHC-CCHHH
T ss_conf 98758899984-99999
No 3
>d2au5a1 a.244.1.1 (A:1-132) Hypothetical protein EF2947 {Enterococcus faecalis [TaxId: 1351]}
Probab=5.26 E-value=1e+02 Score=13.38 Aligned_cols=11 Identities=55% Similarity=0.884 Sum_probs=7.1
Q ss_pred HCCCCHHHHHH
Q ss_conf 13755689999
Q 537021.9.peg.3 25 SFGCSDEFILK 35 (43)
Q Consensus 25 sfgcsdefilk 35 (43)
-.-|+||||..
T Consensus 119 LLL~~DE~I~~ 129 (132)
T d2au5a1 119 LLLCSDEFIMY 129 (132)
T ss_dssp HHHTCHHHHHH
T ss_pred HHHCCHHHHHH
T ss_conf 99804698874
No 4
>d1tfra1 a.60.7.1 (A:183-305) T4 RNase H {Bacteriophage T4 [TaxId: 10665]}
Probab=5.08 E-value=47 Score=14.98 Aligned_cols=12 Identities=33% Similarity=0.556 Sum_probs=7.3
Q ss_pred ECCCCC--CHHHHH
Q ss_conf 227765--403321
Q 537021.9.peg.3 14 IEGDKS--IPSFFS 25 (43)
Q Consensus 14 iegdks--ipsffs 25 (43)
|-||+| ||++||
T Consensus 12 ikGD~sDgIPnils 25 (123)
T d1tfra1 12 LKGDKKDNVASVKV 25 (123)
T ss_dssp HHEEGGGTEECTTS
T ss_pred HCCCCCCCCCCCCC
T ss_conf 74798678286135
No 5
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]}
Probab=3.44 E-value=1.6e+02 Score=12.41 Aligned_cols=26 Identities=27% Similarity=0.551 Sum_probs=14.5
Q ss_pred CCCCEEEECC----CCCCHHHHHCCCCHHH
Q ss_conf 3870575227----7654033213755689
Q 537021.9.peg.3 7 AGTDVLDIEG----DKSIPSFFSFGCSDEF 32 (43)
Q Consensus 7 agtdvldieg----dksipsffsfgcsdef 32 (43)
-|.|-..+.+ ...|-.||||.|.--.
T Consensus 5 eG~~y~~~~~p~~~~~~VvEffdy~Cp~C~ 34 (188)
T d1fvka_ 5 DGKQYTTLEKPVAGAPQVLEFFSFFCPHCY 34 (188)
T ss_dssp BTTTEEECSSCCTTCCSEEEEECTTCHHHH
T ss_pred CCCCCEECCCCCCCCCEEEEEECCCCHHHH
T ss_conf 898817898889999779999778885048
No 6
>d1lpba2 g.3.10.1 (A:45-90) (Pro)colipase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=3.03 E-value=1.9e+02 Score=12.13 Aligned_cols=12 Identities=50% Similarity=0.592 Sum_probs=8.7
Q ss_pred EEEECCCCCCHH
Q ss_conf 575227765403
Q 537021.9.peg.3 11 VLDIEGDKSIPS 22 (43)
Q Consensus 11 vldiegdksips 22 (43)
-|.-|+||||-.
T Consensus 22 GLtCe~D~sivG 33 (46)
T d1lpba2 22 GLTCEGDKSLVG 33 (46)
T ss_dssp TEEEESCCCHHH
T ss_pred CCEECCCCEEEE
T ss_conf 831326714788
No 7
>d2c1wa1 d.294.1.1 (A:6-289) EndoU {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=3.01 E-value=2e+02 Score=11.96 Aligned_cols=20 Identities=35% Similarity=0.361 Sum_probs=13.9
Q ss_pred CCCCCHHHHHCCCCHHHHHHH
Q ss_conf 776540332137556899998
Q 537021.9.peg.3 16 GDKSIPSFFSFGCSDEFILKS 36 (43)
Q Consensus 16 gdksipsffsfgcsdefilks 36 (43)
..|.+-||| .|+|-||.+--
T Consensus 217 ~~K~~gs~F-vGtSPEfElAl 236 (284)
T d2c1wa1 217 MVKPVGSSF-IGVSPEFEFAL 236 (284)
T ss_dssp BCCCCEEEE-CSCCHHHHHHH
T ss_pred CCCCCCCEE-ECCCHHHHHHH
T ss_conf 133466468-50798899999
No 8
>d1xuba1 d.21.1.2 (A:1-128) Phenazine biosynthesis protein PhzF {Pseudomonas fluorescens [TaxId: 294]}
Probab=2.87 E-value=2.1e+02 Score=11.88 Aligned_cols=26 Identities=19% Similarity=0.500 Sum_probs=13.0
Q ss_pred EEEECCCCCEEEECCCCCCHHHHHCC
Q ss_conf 13410387057522776540332137
Q 537021.9.peg.3 2 VRVQKAGTDVLDIEGDKSIPSFFSFG 27 (43)
Q Consensus 2 vrvqkagtdvldiegdksipsffsfg 27 (43)
|++.+.+.++.-++=+...|.|-+.|
T Consensus 103 v~~~~~~~~~~~~~~~~p~P~~~~l~ 128 (128)
T d1xuba1 103 FELERQNGSVIAASMDQPIPTWTALG 128 (128)
T ss_dssp EEEEEETTEEEEEEEECCCCEEEECS
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCC
T ss_conf 99992499699999729998244688
No 9
>d1b33n_ d.30.1.1 (N:) Allophycocyanin linker chain (domain) {Mastigocladus laminosus [TaxId: 83541]}
Probab=2.59 E-value=1.7e+02 Score=12.35 Aligned_cols=14 Identities=36% Similarity=0.636 Sum_probs=10.0
Q ss_pred EEECCCCCEEEECC
Q ss_conf 34103870575227
Q 537021.9.peg.3 3 RVQKAGTDVLDIEG 16 (43)
Q Consensus 3 rvqkagtdvldieg 16 (43)
|.||+|-.++..|-
T Consensus 42 rI~K~GGkI~KVeL 55 (67)
T d1b33n_ 42 RIQKMGGKIVKVEL 55 (67)
T ss_dssp HHHHTTCEEEEEEE
T ss_pred HHHHHCCEEEEEEE
T ss_conf 99981880899998
No 10
>d1ra0a1 b.92.1.2 (A:4-55,A:376-426) Cytosine deaminase {Escherichia coli [TaxId: 562]}
Probab=2.52 E-value=2.4e+02 Score=11.66 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=17.6
Q ss_pred CCCCEEEECCCCCCHHHHHCCCCHHH
Q ss_conf 38705752277654033213755689
Q 537021.9.peg.3 7 AGTDVLDIEGDKSIPSFFSFGCSDEF 32 (43)
Q Consensus 7 agtdvldiegdksipsffsfgcsdef 32 (43)
.+.|++|.+|...+| ++-.-+.|.|
T Consensus 38 ~~~d~lDa~GgL~~p-~~il~A~~~~ 62 (103)
T d1ra0a1 38 ITENSLDAEQGLVIP-LIILPAENGF 62 (103)
T ss_dssp CCTTEEECTTCEEES-EEEESSSSHH
T ss_pred CCCCCEECCCCCCCC-CEEECCCCHH
T ss_conf 777503056893167-3888289979
Done!