RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.34_1
         (208 letters)



>gnl|CDD|184162 PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase;
           Provisional.
          Length = 526

 Score =  264 bits (678), Expect = 1e-71
 Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 5/210 (2%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LH PLT +T+ ++  E L+K K GV IINCARGG++DE ALAE L+SG VA A  DVFE 
Sbjct: 200 LHTPLTPETRGLIGAEELAKMKPGVRIINCARGGIIDEAALAEALKSGKVAGAALDVFEK 259

Query: 61  EPALQNPLFGLPNVFCAPYLGASTVESQEKVAIQLAHQMSDYLIDGVVSNALNMAIISFE 120
           EP   +PLF LPNV   P+LGAST E+QE VAIQ+A Q+ D L  G V NA+N+  I+ E
Sbjct: 260 EPPTDSPLFELPNVVVTPHLGASTAEAQENVAIQVAEQVIDALRGGPVPNAVNLPSITAE 319

Query: 121 EAPLVKPFMTLADHLGCFIGQLISESIQEIQIIYDGSTAVMNTMVLNSAVLAGIVRVW-- 178
           EA  +KP++ LA+ LG    QL    I+ ++I Y G  A  +T  L +A L G++     
Sbjct: 320 EAEKLKPYLDLAEKLGSLAAQLADGPIKSVEITYRGELAEEDTEPLTAAALKGLLSPVLG 379

Query: 179 -RVGANIISAPIIIKENAIILSTIKRDKSG 207
            RV  N ++AP++ KE  I +   K ++S 
Sbjct: 380 ERV--NYVNAPLLAKERGIEVEESKSEESP 407


>gnl|CDD|162302 TIGR01327, PGDH, D-3-phosphoglycerate dehydrogenase.  This model
           represents a long form of D-3-phosphoglycerate
           dehydrogenase, the serA gene of one pathway of serine
           biosynthesis. Shorter forms, scoring between trusted and
           noise cutoff, include SerA from E. coli.
          Length = 525

 Score =  219 bits (561), Expect = 3e-58
 Identities = 87/200 (43%), Positives = 121/200 (60%), Gaps = 1/200 (0%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           +H PLT +T+ ++  E L+K K GV I+NCARGG++DE AL E L+ GHV  A  DVFE 
Sbjct: 199 VHTPLTPETRGLIGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEK 258

Query: 61  EPALQNPLFGLPNVFCAPYLGASTVESQEKVAIQLAHQMSDYLIDGVVSNALNMAIISFE 120
           EP   NPLF L NV   P+LGAST E+QE VA Q+A Q+ D L    V NA+N   I  +
Sbjct: 259 EPPTDNPLFDLDNVIATPHLGASTREAQENVATQVAEQVLDALKGLPVPNAVNAPGIDAD 318

Query: 121 EAPLVKPFMTLADHLGCFIGQLISESIQEIQIIYDGSTAVMNTMVLNSAVLAGIVR-VWR 179
               +KP++ LA+ LG   GQL+  ++Q +++ Y G  A  N+  L  A L G++  V  
Sbjct: 319 VMEKLKPYLDLAEKLGKLAGQLLDGAVQSVEVTYRGELATENSEPLTRAALKGLLSPVLD 378

Query: 180 VGANIISAPIIIKENAIILS 199
              N+++AP + KE  I + 
Sbjct: 379 DEVNMVNAPAVAKERGITVE 398


>gnl|CDD|183316 PRK11790, PRK11790, D-3-phosphoglycerate dehydrogenase;
           Provisional.
          Length = 409

 Score =  101 bits (255), Expect = 1e-22
 Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 5/118 (4%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LHVP T  TKN++  E L+  K G  +IN +RG +VD +ALA+ L+SGH+A A  DVF V
Sbjct: 209 LHVPETPSTKNMIGAEELALMKPGAILINASRGTVVDIDALADALKSGHLAGAAIDVFPV 268

Query: 61  EPALQN-----PLFGLPNVFCAPYLGASTVESQEKVAIQLAHQMSDYLIDGVVSNALN 113
           EP         PL GL NV   P++G ST E+QE + +++A ++  Y  +G   +A+N
Sbjct: 269 EPKSNGDPFESPLRGLDNVILTPHIGGSTQEAQENIGLEVAGKLVKYSDNGSTLSAVN 326


>gnl|CDD|183914 PRK13243, PRK13243, glyoxylate reductase; Reviewed.
          Length = 333

 Score = 91.0 bits (226), Expect = 2e-19
 Identities = 45/117 (38%), Positives = 69/117 (58%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LHVPLT +T +++N+E L   K    ++N ARG +VD  AL + L+ G +A AG DVFE 
Sbjct: 210 LHVPLTKETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEE 269

Query: 61  EPALQNPLFGLPNVFCAPYLGASTVESQEKVAIQLAHQMSDYLIDGVVSNALNMAII 117
           EP     LF L NV  AP++G++T E++E +A  +A  +  +    V    +N  ++
Sbjct: 270 EPYYNEELFSLKNVVLAPHIGSATFEAREGMAELVAENLIAFKRGEVPPTLVNREVV 326


>gnl|CDD|180588 PRK06487, PRK06487, glycerate dehydrogenase; Provisional.
          Length = 317

 Score = 90.1 bits (224), Expect = 4e-19
 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 3/106 (2%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LH PLT  T++++    L+  K G  +IN ARGGLVDE ALA+ L+SGH+  A  DV  V
Sbjct: 203 LHCPLTEHTRHLIGARELALMKPGALLINTARGGLVDEQALADALRSGHLGGAATDVLSV 262

Query: 61  EPALQ-NPLFG--LPNVFCAPYLGASTVESQEKVAIQLAHQMSDYL 103
           EP +  NPL    +P +   P+    + E+++++  QLA     + 
Sbjct: 263 EPPVNGNPLLAPDIPRLIVTPHSAWGSREARQRIVGQLAENARAFF 308


>gnl|CDD|185307 PRK15409, PRK15409, bifunctional glyoxylate/hydroxypyruvate
           reductase B; Provisional.
          Length = 323

 Score = 85.2 bits (211), Expect = 1e-17
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 1/91 (1%)

Query: 3   VPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEP 62
           +PLT++T ++   E  +K KS    IN  RG +VDENAL   LQ G +  AG DVFE EP
Sbjct: 208 LPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267

Query: 63  -ALQNPLFGLPNVFCAPYLGASTVESQEKVA 92
            ++ +PL  LPNV   P++G++T E++  +A
Sbjct: 268 LSVDSPLLSLPNVVAVPHIGSATHETRYNMA 298


>gnl|CDD|168735 PRK06932, PRK06932, glycerate dehydrogenase; Provisional.
          Length = 314

 Score = 80.2 bits (198), Expect = 4e-16
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LH PLT  T+N++N E L+  K    +IN  RG LVDE AL + L++G +A A  DV   
Sbjct: 203 LHCPLTETTQNLINAETLALMKPTAFLINTGRGPLVDEQALLDALENGKIAGAALDVLVK 262

Query: 61  E-PALQNPLFG----LPNVFCAPYL 80
           E P   NPL      LPN+   P++
Sbjct: 263 EPPEKDNPLIQAAKRLPNLLITPHI 287


>gnl|CDD|178684 PLN03139, PLN03139, formate dehydrogenase; Provisional.
          Length = 386

 Score = 77.2 bits (190), Expect = 3e-15
 Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           ++ PLT KT+ + NKE ++K K GV I+N ARG ++D  A+A+   SGH+   G DV+  
Sbjct: 261 INTPLTEKTRGMFNKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYP 320

Query: 61  EPALQN-PLFGLPNVFCAPYLGASTVESQEKVA 92
           +PA ++ P   +PN    P++  +T+++Q + A
Sbjct: 321 QPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYA 353


>gnl|CDD|181041 PRK07574, PRK07574, formate dehydrogenase; Provisional.
          Length = 385

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           +H PL  +T+++ + + LS+ K G  ++N ARG +VD +A+   L+SGH+A    DV+  
Sbjct: 254 IHCPLHPETEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFP 313

Query: 61  EPALQN-PLFGLPNVFCAPYLGASTVESQEKVA 92
           +PA  + P   +P     P++  +T+ +Q + A
Sbjct: 314 QPAPADHPWRTMPRNGMTPHISGTTLSAQARYA 346


>gnl|CDD|181414 PRK08410, PRK08410, 2-hydroxyacid dehydrogenase; Provisional.
          Length = 311

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           +H PL  KTKN++  + L   K G  +IN  RGG+V+E  LA+ L    +  AG DV E 
Sbjct: 202 IHAPLNEKTKNLIAYKELKLLKDGAILINVGRGGIVNEKDLAKALDEKDIY-AGLDVLEK 260

Query: 61  EPALQN-PLFGLPN---VFCAPYLGASTVESQEKVAIQLAHQMSDYL 103
           EP  +N PL  + N   +   P++  ++ E+++ +  ++   + D+L
Sbjct: 261 EPMEKNHPLLSIKNKEKLLITPHIAWASKEARKTLIEKVKENIKDFL 307


>gnl|CDD|177941 PLN02306, PLN02306, hydroxypyruvate reductase.
          Length = 386

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 30/92 (32%), Positives = 53/92 (57%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LH  L   T +++NKE L+  K    ++N +RG ++DE AL E L++  +   G DVFE 
Sbjct: 242 LHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEVALVEHLKANPMFRVGLDVFED 301

Query: 61  EPALQNPLFGLPNVFCAPYLGASTVESQEKVA 92
           EP ++  L  + N    P++ +++  ++E +A
Sbjct: 302 EPYMKPGLADMKNAVVVPHIASASKWTREGMA 333


>gnl|CDD|178516 PLN02928, PLN02928, oxidoreductase family protein.
          Length = 347

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 4   PLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEPA 63
            LT +T  I+N E LS  K G  ++N ARGGL+D +A+   L+SGH+     DV   EP 
Sbjct: 235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYDAVLAALESGHLGGLAIDVAWSEPF 294

Query: 64  LQN-PLFGLPNVFCAPYLGASTVESQE---KVAIQLAHQMS 100
             + P+   PNV   P++   T  S     K+    A Q+ 
Sbjct: 295 DPDDPILKHPNVIITPHVAGVTEYSYRSMGKIVGDAALQLH 335


>gnl|CDD|166874 PRK00257, PRK00257, erythronate-4-phosphate dehydrogenase;
           Validated.
          Length = 381

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 1   LHVPLTN----KTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFD 56
           LH PLT      T+++L++  L+  + G  +IN +RG +VD  AL E L SG   +A  D
Sbjct: 173 LHTPLTKEGEHPTRHLLDEAFLASLRPGAWLINASRGAVVDNQALREALLSGEDLDAVLD 232

Query: 57  VFEVEP 62
           V+E EP
Sbjct: 233 VWEGEP 238


>gnl|CDD|181499 PRK08605, PRK08605, D-lactate dehydrogenase; Validated.
          Length = 332

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 23/61 (37%), Positives = 31/61 (50%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LH+P T     + N +     K G   +NCARG LVD  AL + L +G +  A  D +E 
Sbjct: 206 LHMPATKYNHYLFNADLFKHFKKGAVFVNCARGSLVDTKALLDALDNGLIKGAALDTYEF 265

Query: 61  E 61
           E
Sbjct: 266 E 266


>gnl|CDD|185366 PRK15469, ghrA, bifunctional glyoxylate/hydroxypyruvate reductase
           A; Provisional.
          Length = 312

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 3   VPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEP 62
           +P T +T  I+N++ L +   G  ++N ARG  V E+ L   L SG V  A  DVF  EP
Sbjct: 198 LPNTPETVGIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP 257

Query: 63  -ALQNPLFGLPNVFCAPYLGAST 84
              ++PL+  P V   P++ A T
Sbjct: 258 LPPESPLWQHPRVAITPHVAAVT 280


>gnl|CDD|183550 PRK12480, PRK12480, D-lactate dehydrogenase; Provisional.
          Length = 330

 Score = 47.6 bits (113), Expect = 3e-06
 Identities = 17/61 (27%), Positives = 30/61 (49%)

Query: 1   LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           LHVP   ++ ++ +K      K G  ++N ARG +++   L   +  G +  A  D +E 
Sbjct: 204 LHVPANKESYHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYEN 263

Query: 61  E 61
           E
Sbjct: 264 E 264


>gnl|CDD|102375 PRK06436, PRK06436, glycerate dehydrogenase; Provisional.
          Length = 303

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 3   VPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEP 62
           +PLT++T+ ++N + LS  + G+ IIN AR  +VD+N +   L++ +      DV+  EP
Sbjct: 181 LPLTDETRGMINSKMLSLFRKGLAIINVARADVVDKNDMLNFLRNHNDKYYLSDVWWNEP 240

Query: 63  ALQNPLFGLPNVFCAPYLGASTVESQEKVAIQLA 96
            +        NV  +P++         + A+ LA
Sbjct: 241 IITETN--PDNVILSPHVAGGMSGEIMQPAVALA 272


>gnl|CDD|185335 PRK15438, PRK15438, erythronate-4-phosphate dehydrogenase PdxB;
           Provisional.
          Length = 378

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 1   LHVPLTN----KTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFD 56
            H PL      KT ++ +++ +   K G  +IN  RG +VD  AL   L  G       D
Sbjct: 173 FHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLD 232

Query: 57  VFEVEPALQNPLFGLPNVFCAPYLGASTVESQEKVAIQLAHQMSDYL 103
           V+E EP L   L    ++   P++   T+E + +   Q+    S ++
Sbjct: 233 VWEGEPELNVELLKKVDI-GTPHIAGYTLEGKARGTTQVFEAYSKFI 278


>gnl|CDD|130785 TIGR01724, hmd_rel, H2-forming
           N(5),N(10)-methenyltetrahydromethanopterin
           dehydrogenase-related protein.  This model represents a
           sister clade to the authenticated coenzyme
           F420-dependent
           N(5),N(10)-methenyltetrahydromethanopterin reductase
           (HMD) of TIGR01723. Two members, designated HmdII and
           HmdIII, are found. Members are restricted to
           methanogens, but the function is unknown.
          Length = 341

 Score = 29.9 bits (67), Expect = 0.53
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 155 DGSTAVMNTMVLNSAV-LAGIVRVWRVGANIISAPIIIKENAIILS 199
           D ++AV +   L +AV LAG++  + VG  II+AP  + E  I+++
Sbjct: 195 DVTSAVADMGSLVTAVALAGVLDYYYVGTQIINAPKEMIEKQILMT 240


>gnl|CDD|183551 PRK12484, PRK12484, nicotinate phosphoribosyltransferase;
           Provisional.
          Length = 443

 Score = 28.2 bits (63), Expect = 1.8
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 11/56 (19%)

Query: 5   LTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEV 60
           L+  T+ IL+   L      V I+  A GGL DE  +A LL +G    A  D F V
Sbjct: 264 LSKATRAILDAAGLE----QVKIV--ASGGL-DEYRIAALLAAG----APIDGFGV 308


>gnl|CDD|183593 PRK12557, PRK12557, H(2)-dependent methylenetetrahydromethanopterin
           dehydrogenase-related protein; Provisional.
          Length = 342

 Score = 27.4 bits (61), Expect = 2.6
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 155 DGSTAVMNTMVLNSAV-LAGIVRVWRVGANIISAPIIIKENAIILS 199
           D  +AV +   L +AV L+G++  + VG  II AP  + E  I+++
Sbjct: 195 DVVSAVADMGSLVTAVALSGVLDYYSVGTKIIKAPKEMIEKQILMT 240


>gnl|CDD|178354 PLN02753, PLN02753, triacylglycerol lipase.
          Length = 531

 Score = 26.6 bits (58), Expect = 4.3
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 42  AELLQSGHVAEAGFDVFEVEPA 63
           +EL++ G +A+A +D F+ +PA
Sbjct: 129 SELIRYGEMAQACYDAFDFDPA 150


>gnl|CDD|182875 PRK10973, PRK10973, glycerol-3-phosphate transporter membrane
           protein; Provisional.
          Length = 281

 Score = 25.9 bits (57), Expect = 8.0
 Identities = 11/36 (30%), Positives = 22/36 (61%)

Query: 156 GSTAVMNTMVLNSAVLAGIVRVWRVGANIISAPIII 191
            ++A    M+LNS V+A  + V ++  +++SA  I+
Sbjct: 68  NNSAPFGRMLLNSFVMAFSITVGKITVSMLSAFAIV 103


>gnl|CDD|182794 PRK10869, PRK10869, recombination and repair protein; Provisional.
          Length = 553

 Score = 25.7 bits (57), Expect = 8.1
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 140 GQLISESIQEIQIIYDGSTAVMNTMVLNSAV 170
           GQL++ S   +Q++ DG    + +  L SA 
Sbjct: 221 GQLLTTSQNALQLLADGEEVNILSQ-LYSAK 250


>gnl|CDD|179892 PRK04922, tolB, translocation protein TolB; Provisional.
          Length = 433

 Score = 25.8 bits (57), Expect = 8.7
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 48  GHVAEAGFDVFEVEPALQNPLFGLPNVFCAPYLGASTVESQEKVAIQLAHQMSD 101
           G V +AG   +EVE       + L +VF    L    + +      Q AHQ++D
Sbjct: 107 GRVKDAGDGRYEVE-------YELFDVFKGERLLGLRLTAPASAMRQAAHQIAD 153


>gnl|CDD|147938 pfam06046, Sec6, Exocyst complex component Sec6.  Sec6 is a
           component of the multiprotein exocyst complex. Sec6
           interacts with Sec8, Sec10 and Exo70.These exocyst
           proteins localize to regions of active exocytosis-at the
           growing ends of interphase cells and in the medial
           region of cells undergoing cytokinesis-in an
           F-actin-dependent and exocytosis- independent manner.
          Length = 556

 Score = 25.8 bits (57), Expect = 8.7
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 4/73 (5%)

Query: 78  PYLGASTVESQEKVAIQLAHQMSDYLIDGVVSNALNMAIISFEEAPLVKPFMTLADHLGC 137
            YL A     Q K     A  +    +  V S         FEE  L+  F+ L+     
Sbjct: 307 EYLIA-LANDQLK-CADYASSLLQKYLPKVSSKYEERITEEFEE--LLDGFVDLSKECIR 362

Query: 138 FIGQLISESIQEI 150
            + +LI   +Q  
Sbjct: 363 LLLELIFNDLQPA 375


>gnl|CDD|178501 PLN02913, PLN02913, dihydrofolate synthetase.
          Length = 510

 Score = 25.6 bits (56), Expect = 9.9
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 133 DHLGCFIGQLISESIQEIQIIYDGSTAVMNTMVLNSAVLAGIVRVWRVGANIISAPIIIK 192
           +HL    G L S ++ +  II  G       +VL    L  I  + R  A+ +++P++  
Sbjct: 209 EHLAALGGSLESIALAKSGIIKQG-----RPVVLGGPFLPHIESILRDKASSMNSPVVSA 263

Query: 193 ENAIILSTIK 202
            +  + S+IK
Sbjct: 264 SDPGVRSSIK 273


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.319    0.135    0.382 

Gapped
Lambda     K      H
   0.267   0.0733    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 3,214,393
Number of extensions: 195467
Number of successful extensions: 367
Number of sequences better than 10.0: 1
Number of HSP's gapped: 361
Number of HSP's successfully gapped: 35
Length of query: 208
Length of database: 5,994,473
Length adjustment: 89
Effective length of query: 119
Effective length of database: 4,071,361
Effective search space: 484491959
Effective search space used: 484491959
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.0 bits)