Query 537021.9.peg.348_1 Match_columns 42 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 33803 Date Tue May 24 18:45:30 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_348.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >2k1i_A Mucosal alpha-defensin 24.2 27 0.00079 17.5 0.8 15 23-37 18-32 (32) 2 >1swv_A Phosphonoacetaldehyde 21.1 76 0.0022 15.2 2.8 20 2-21 59-78 (84) 3 >1qtn_A Caspase-8; complex (pr 20.7 32 0.00096 17.1 0.7 29 2-30 52-80 (164) 4 >3d79_A PUA domain, putative u 19.3 79 0.0023 15.1 2.4 27 3-29 17-43 (77) 5 >3iru_A Phoshonoacetaldehyde h 18.9 85 0.0025 15.0 2.8 20 2-21 60-79 (86) 6 >2ql9_A Caspase-7; caspase-7, 14.6 64 0.0019 15.6 1.0 29 2-30 66-94 (173) 7 >2wdp_A Caspase-6; alternative 9.5 87 0.0026 14.9 0.3 28 3-30 67-94 (293) 8 >2igr_A Anticancer peptide CB1 9.3 1.7E+02 0.005 13.5 2.2 14 5-18 6-19 (34) 9 >3cai_A Possible aminotransfer 8.3 1.6E+02 0.0047 13.6 1.2 17 1-17 79-95 (96) 10 >2nn3_C Caspase-1; cysteine pr 8.2 1.3E+02 0.0038 14.1 0.8 28 2-29 81-108 (310) No 1 >>2k1i_A Mucosal alpha-defensin; antimicrobial peptide, rhesus macaque, anti parallel beta sheet, antimicrobial protein; NMR {Synthetic} (A:) Probab=24.18 E-value=27 Score=17.52 Aligned_cols=15 Identities=40% Similarity=0.862 Sum_probs=12.0 Q ss_pred HCCCCCCCEEEEEEE Q ss_conf 414453110010110 Q 537021.9.peg.3 23 IGKNLNGAILNVCCI 37 (42) Q Consensus 23 igknlngailnvcci 37 (42) -.-|.||.|...||- T Consensus 18 gscningrifslccr 32 (32) T 2k1i_A 18 GSCNINGRIFSLCCR 32 (32) T ss_dssp EEEEETTEEEEEEEC T ss_pred CCCCCCCEEEEEEEC T ss_conf 742287888342409 No 2 >>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} (A:20-103) Probab=21.12 E-value=76 Score=15.22 Aligned_cols=20 Identities=20% Similarity=0.647 Sum_probs=16.5 Q ss_pred CCHHHHHHHHHHHHHHHHHH Q ss_conf 72467999999999997456 Q 537021.9.peg.3 2 NSDKDVERIFAVFKKIFFEK 21 (42) Q Consensus 2 nsdkdverifavfkkiffek 21 (42) -++.||.+||+.|....+++ T Consensus 59 ~te~DV~~iy~~F~p~~~~~ 78 (84) T 1swv_A 59 PTEADIQEMYEEFEEILFAI 78 (84) T ss_dssp CCHHHHHHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHHHHHHHH T ss_conf 76888999999999999998 No 3 >>1qtn_A Caspase-8; complex (protease/inhibitor), apoptosis, dithiane-DIOL, caspase, cysteine-protease, tetramer; 1.20A {Homo sapiens} (A:) Probab=20.74 E-value=32 Score=17.09 Aligned_cols=29 Identities=14% Similarity=0.230 Sum_probs=23.3 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 72467999999999997456541445311 Q 537021.9.peg.3 2 NSDKDVERIFAVFKKIFFEKSIGKNLNGA 30 (42) Q Consensus 2 nsdkdverifavfkkiffeksigknlnga 30 (42) .+++|++++-.+|+++=|+-.+-+|+... T Consensus 52 Gs~~D~~~L~~~F~~Lgf~V~~~~n~t~~ 80 (164) T 1qtn_A 52 GTHLDAGALTTTFEELHFEIKPHDDCTVE 80 (164) T ss_dssp THHHHHHHHHHHHHHTTCEEEEEESCCHH T ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCHH T ss_conf 74999999999999889989995389889 No 4 >>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii} (A:1-77) Probab=19.26 E-value=79 Score=15.13 Aligned_cols=27 Identities=41% Similarity=0.474 Sum_probs=22.5 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 246799999999999745654144531 Q 537021.9.peg.3 3 SDKDVERIFAVFKKIFFEKSIGKNLNG 29 (42) Q Consensus 3 sdkdverifavfkkiffeksigknlng 29 (42) |.|+|..|.+....||=|.--+|-++- T Consensus 17 SKKevk~Ii~~ms~iFGeEiA~Kml~K 43 (77) T 3d79_A 17 SKKDVKEIIAQLSQMFGEEIARKMLNK 43 (77) T ss_dssp CHHHHHHHHHHHHHHHCHHHHHHHCCT T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCC T ss_conf 988999999999867494532367530 No 5 >>3iru_A Phoshonoacetaldehyde hydolase like protein; phosphonoacetaldehyde hydrolase like protein, structural genomics, PSI-2; 2.30A {Oleispira antarctica} (A:27-112) Probab=18.87 E-value=85 Score=14.96 Aligned_cols=20 Identities=20% Similarity=0.539 Sum_probs=16.4 Q ss_pred CCHHHHHHHHHHHHHHHHHH Q ss_conf 72467999999999997456 Q 537021.9.peg.3 2 NSDKDVERIFAVFKKIFFEK 21 (42) Q Consensus 2 nsdkdverifavfkkiffek 21 (42) -++.||.+||+.|....+++ T Consensus 60 ~~e~DV~~iy~~F~p~~~~~ 79 (86) T 3iru_A 60 SNEEDIKRLYDLFAPIQTRI 79 (86) T ss_dssp CCHHHHHHHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHHHHHHHH T ss_conf 66999999999999999986 No 6 >>2ql9_A Caspase-7; caspase-7, cysteine protease, alternative splicing, apoptosis, cytoplasm, hydrolase, thiol protease, zymogen; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A (A:) Probab=14.62 E-value=64 Score=15.59 Aligned_cols=29 Identities=28% Similarity=0.489 Sum_probs=24.2 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 72467999999999997456541445311 Q 537021.9.peg.3 2 NSDKDVERIFAVFKKIFFEKSIGKNLNGA 30 (42) Q Consensus 2 nsdkdverifavfkkiffeksigknlnga 30 (42) .+++|++.+-.+|+++=|+-.+..|+... T Consensus 66 g~~~D~~~l~~~f~~lgf~V~~~~n~t~~ 94 (173) T 2ql9_A 66 GTDKDAEALFKCFRSLGFDVIVYNDCSCA 94 (173) T ss_dssp THHHHHHHHHHHHHHHTEEEEEEESCCHH T ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCHH T ss_conf 72888999999999889989996188989 No 7 >>2wdp_A Caspase-6; alternative splicing, zymogen, protease, apoptosis, hydrolase, cytoplasm, polymorphism, thiol protease, phosphoprotein; 1.95A {Homo sapiens} (A:) Probab=9.54 E-value=87 Score=14.93 Aligned_cols=28 Identities=18% Similarity=0.214 Sum_probs=23.7 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 2467999999999997456541445311 Q 537021.9.peg.3 3 SDKDVERIFAVFKKIFFEKSIGKNLNGA 30 (42) Q Consensus 3 sdkdverifavfkkiffeksigknlnga 30 (42) +++|++++-.+|+++-|+-.+-+|+... T Consensus 67 ~~~D~~~l~~~f~~lgf~V~~~~n~t~~ 94 (293) T 2wdp_A 67 TCADRDNLTRRFSDLGFEVKCFNDLKAE 94 (293) T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESSSCH T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCHH T ss_conf 1899999999999889989996188999 No 8 >>2igr_A Anticancer peptide CB1A; cecropin, antimicrobial peptide, ploycationic peptide, cecropin fingerprint sequence, de novo protein, lipid binding protein; NMR {Synthetic} (A:) Probab=9.30 E-value=1.7e+02 Score=13.46 Aligned_cols=14 Identities=50% Similarity=0.740 Sum_probs=10.2 Q ss_pred HHHHHHHHHHHHHH Q ss_conf 67999999999997 Q 537021.9.peg.3 5 KDVERIFAVFKKIF 18 (42) Q Consensus 5 kdverifavfkkif 18 (42) |..|.-+.|||||- T Consensus 6 kkiekkwkvfkkie 19 (34) T 2igr_A 6 KKIEKKWKVFKKIE 19 (34) T ss_dssp HHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHH T ss_conf 99999999999999 No 9 >>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis H37RV} (A:24-35,A:323-406) Probab=8.29 E-value=1.6e+02 Score=13.59 Aligned_cols=17 Identities=6% Similarity=0.319 Sum_probs=12.4 Q ss_pred CCCHHHHHHHHHHHHHH Q ss_conf 97246799999999999 Q 537021.9.peg.3 1 LNSDKDVERIFAVFKKI 17 (42) Q Consensus 1 lnsdkdverifavfkki 17 (42) .|+..|+++.+..+++| T Consensus 79 ~nT~eEId~li~~l~~I 95 (96) T 3cai_A 79 YSTMAEVDQLVRALASL 95 (96) T ss_dssp TCCHHHHHHHHHHHHTC T ss_pred CCCHHHHHHHHHHHHHH T ss_conf 89999999999999861 No 10 >>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda} (C:) Probab=8.23 E-value=1.3e+02 Score=14.06 Aligned_cols=28 Identities=21% Similarity=0.350 Sum_probs=22.9 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 7246799999999999745654144531 Q 537021.9.peg.3 2 NSDKDVERIFAVFKKIFFEKSIGKNLNG 29 (42) Q Consensus 2 nsdkdverifavfkkiffeksigknlng 29 (42) ++++|++.+-.+|+++-|+-.+-.|+.. T Consensus 81 g~~~Da~~l~~~f~~lGf~V~~~~nlt~ 108 (310) T 2nn3_C 81 GTNVDSDNLSKVLKTLGFKVTVFPNLKS 108 (310) T ss_dssp THHHHHHHHHHHHHHTTCEEEEEESCCH T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCH T ss_conf 8099999999999988998999549999 Done!