BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 537021.9.peg.36_1
         (29 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>537021.9.peg.36_1 
          Length = 29

 Score = 61.6 bits (148), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/29 (100%), Positives = 29/29 (100%)

Query: 1  MVRIIGHYDGLAVRSTAKVTQSCCRMLKK 29
          MVRIIGHYDGLAVRSTAKVTQSCCRMLKK
Sbjct: 1  MVRIIGHYDGLAVRSTAKVTQSCCRMLKK 29


>gi|254780290|ref|YP_003064703.1| quinone oxidoreductase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 332

 Score = 20.0 bits (40), Expect = 8.4,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 5   IGHYDGLAVRSTAKVTQSCCRMLK 28
           +  Y G  V +TAK  + C   LK
Sbjct: 165 LASYFGATVYTTAKSEEKCLACLK 188


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.330    0.136    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,608
Number of Sequences: 1233
Number of extensions: 184
Number of successful extensions: 2
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 29
length of database: 328,796
effective HSP length: 4
effective length of query: 25
effective length of database: 323,864
effective search space:  8096600
effective search space used:  8096600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 31 (16.5 bits)