Query         537021.9.peg.374_1
Match_columns 42
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Tue May 24 19:04:45 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_374.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1gwma_ b.18.1.19 (A:) Non-cat  19.1     7.6 0.00056   18.5  -0.8   10   26-35    122-131 (153)
  2 d1vqoe2 d.141.1.1 (E:80-172) R   9.0      27   0.002   15.8  -0.4   16   17-32     75-90  (93)
  3 d1hc8a_ a.4.7.1 (A:) Ribosomal   8.3      32  0.0023   15.5  -0.3   14    5-18      1-14  (74)
  4 d1mhyg_ a.23.3.1 (G:) Methane    7.8      22  0.0016   16.3  -1.4   12   17-28    120-131 (167)
  5 d1mtyg_ a.23.3.1 (G:) Methane    7.7      22  0.0016   16.3  -1.4   12   17-28    117-128 (162)
  6 d1t98a2 a.47.6.1 (A:119-281) C   7.6      58  0.0042   14.2   0.7   14   27-40     31-44  (163)
  7 d1aipc1 a.5.2.2 (C:2-53) Elong   5.2      51  0.0037   14.5  -0.6   11   17-27     15-25  (52)
  8 d1xb2b1 a.5.2.2 (B:56-111) Elo   5.1      52  0.0038   14.4  -0.6   11   17-27     17-27  (56)
  9 d1efub3 a.5.2.2 (B:1-54) Elong   4.7      59  0.0043   14.2  -0.6   11   17-27     17-27  (54)
 10 d4bcla_ b.75.1.1 (A:) Bacterio   3.7   1E+02  0.0075   13.0   0.1   16   11-27     31-46  (359)

No 1  
>d1gwma_ b.18.1.19 (A:) Non-catalytic protein 1, Ncp1 {Piromyces equi [TaxId: 99929]}
Probab=19.11  E-value=7.6  Score=18.53  Aligned_cols=10  Identities=60%  Similarity=1.049  Sum_probs=7.5

Q ss_pred             ECHHHHHHHH
Q ss_conf             3311013444
Q 537021.9.peg.3   26 LDPIWIKNIF   35 (42)
Q Consensus        26 ldpiwiknif   35 (42)
                      -+|||||||.
T Consensus       122 ~~~I~~r~ii  131 (153)
T d1gwma_         122 GDRIWIKNLV  131 (153)
T ss_dssp             CCCEEEEEEE
T ss_pred             CCEEEEEEEE
T ss_conf             9848888887


No 2  
>d1vqoe2 d.141.1.1 (E:80-172) Ribosomal protein L6 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=9.01  E-value=27  Score=15.80  Aligned_cols=16  Identities=31%  Similarity=0.536  Sum_probs=12.0

Q ss_pred             HHHHCCCEEECHHHHH
Q ss_conf             1101363343311013
Q 537021.9.peg.3   17 LPMMDCNVFLDPIWIK   32 (42)
Q Consensus        17 lpmmdcnvfldpiwik   32 (42)
                      ...-|..+|+|-||+-
T Consensus        75 vk~kD~R~FlDGIYv~   90 (93)
T d1vqoe2          75 INDKDVRVFQDGVYIT   90 (93)
T ss_dssp             CSSSCTTTCCCEEEEE
T ss_pred             CCCCCCCEEECCEEEE
T ss_conf             3799765833488997


No 3  
>d1hc8a_ a.4.7.1 (A:) Ribosomal protein L11, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=8.26  E-value=32  Score=15.49  Aligned_cols=14  Identities=64%  Similarity=0.982  Sum_probs=10.8

Q ss_pred             EEEEECCCHHHHHH
Q ss_conf             07998497443111
Q 537021.9.peg.3    5 SFIIITPPATVLLP   18 (42)
Q Consensus         5 sfiiitppatvllp   18 (42)
                      .|++-|||++.||-
T Consensus         1 TF~~ktPP~s~llk   14 (74)
T d1hc8a_           1 TFITKTPPAAVLLK   14 (74)
T ss_dssp             CCCCCCCCHHHHHH
T ss_pred             CCCCCCCCHHHHHH
T ss_conf             93105888999999


No 4  
>d1mhyg_ a.23.3.1 (G:) Methane monooxygenase hydrolase, gamma subunit {Methylosinus trichosporium [TaxId: 426]}
Probab=7.78  E-value=22  Score=16.29  Aligned_cols=12  Identities=42%  Similarity=0.750  Sum_probs=8.9

Q ss_pred             HHHHCCCEEECH
Q ss_conf             110136334331
Q 537021.9.peg.3   17 LPMMDCNVFLDP   28 (42)
Q Consensus        17 lpmmdcnvfldp   28 (42)
                      -|||-.|+|++-
T Consensus       120 PPvmPVN~F~~~  131 (167)
T d1mhyg_         120 PPVLPVNVFLRT  131 (167)
T ss_dssp             TTTSCHHHHHHH
T ss_pred             CCCCCEEECCHH
T ss_conf             986651000145


No 5  
>d1mtyg_ a.23.3.1 (G:) Methane monooxygenase hydrolase, gamma subunit {Methylococcus capsulatus [TaxId: 414]}
Probab=7.69  E-value=22  Score=16.26  Aligned_cols=12  Identities=50%  Similarity=0.783  Sum_probs=8.9

Q ss_pred             HHHHCCCEEECH
Q ss_conf             110136334331
Q 537021.9.peg.3   17 LPMMDCNVFLDP   28 (42)
Q Consensus        17 lpmmdcnvfldp   28 (42)
                      -|||-.|+|++.
T Consensus       117 PPvmPVN~F~~~  128 (162)
T d1mtyg_         117 PPIMPVNYFLDG  128 (162)
T ss_dssp             TTTSCHHHHHHH
T ss_pred             CCCCCEECCCHH
T ss_conf             986651000046


No 6  
>d1t98a2 a.47.6.1 (A:119-281) Chromosome partition protein MukF (KicB), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=7.58  E-value=58  Score=14.21  Aligned_cols=14  Identities=36%  Similarity=0.866  Sum_probs=11.3

Q ss_pred             CHHHHHHHHHHHHH
Q ss_conf             31101344444573
Q 537021.9.peg.3   27 DPIWIKNIFVPLKS   40 (42)
Q Consensus        27 dpiwiknifvplks   40 (42)
                      +--|-+|.|.|||-
T Consensus        31 e~~Wr~~V~apLky   44 (163)
T d1t98a2          31 EFHWHRNVYAPLKY   44 (163)
T ss_dssp             HHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHE
T ss_conf             78898751134422


No 7  
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=5.24  E-value=51  Score=14.48  Aligned_cols=11  Identities=36%  Similarity=0.416  Sum_probs=7.6

Q ss_pred             HHHHCCCEEEC
Q ss_conf             11013633433
Q 537021.9.peg.3   17 LPMMDCNVFLD   27 (42)
Q Consensus        17 lpmmdcnvfld   27 (42)
                      .|||||.--|.
T Consensus        15 a~~~dcKkAL~   25 (52)
T d1aipc1          15 AGMMDVKRALE   25 (52)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
T ss_conf             87999999999


No 8  
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=5.13  E-value=52  Score=14.42  Aligned_cols=11  Identities=18%  Similarity=0.658  Sum_probs=7.9

Q ss_pred             HHHHCCCEEEC
Q ss_conf             11013633433
Q 537021.9.peg.3   17 LPMMDCNVFLD   27 (42)
Q Consensus        17 lpmmdcnvfld   27 (42)
                      .|||||.--|+
T Consensus        17 a~~~dcKkAL~   27 (56)
T d1xb2b1          17 YSFINCKKALE   27 (56)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
T ss_conf             88999999999


No 9  
>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=4.66  E-value=59  Score=14.16  Aligned_cols=11  Identities=45%  Similarity=0.691  Sum_probs=7.7

Q ss_pred             HHHHCCCEEEC
Q ss_conf             11013633433
Q 537021.9.peg.3   17 LPMMDCNVFLD   27 (42)
Q Consensus        17 lpmmdcnvfld   27 (42)
                      .|||||.--|+
T Consensus        17 ag~~dCKkAL~   27 (54)
T d1efub3          17 AGMMDCKKALT   27 (54)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
T ss_conf             87999999999


No 10 
>d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein {Prosthecochloris aestuarii, strain 2k [TaxId: 1102]}
Probab=3.75  E-value=1e+02  Score=12.96  Aligned_cols=16  Identities=56%  Similarity=1.047  Sum_probs=0.0

Q ss_pred             CCHHHHHHHHCCCEEEC
Q ss_conf             97443111013633433
Q 537021.9.peg.3   11 PPATVLLPMMDCNVFLD   27 (42)
Q Consensus        11 ppatvllpmmdcnvfld   27 (42)
                      |||.-|||. |||+-++
T Consensus        31 P~a~pllp~-dc~iKi~   46 (359)
T d4bcla_          31 PAAIPLLPT-DCNIRID   46 (359)
T ss_dssp             CCCCSSCCE-EEEEEEE
T ss_pred             CCCCCCCCC-CCCEEEE
T ss_conf             987777666-6622762


Done!