RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= 537021.9.peg.374_1 (42 letters) >gnl|CDD|178895 PRK00140, rplK, 50S ribosomal protein L11; Validated. Length = 141 Score = 25.9 bits (58), Expect = 2.3 Identities = 9/13 (69%), Positives = 11/13 (84%) Query: 5 SFIIITPPATVLL 17 +FI TPPA+VLL Sbjct: 67 TFITKTPPASVLL 79 >gnl|CDD|165147 PHA02782, PHA02782, hypothetical protein; Provisional. Length = 503 Score = 24.6 bits (53), Expect = 5.4 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 3/17 (17%) Query: 16 LLPMMDCNVFL---DPI 29 LLPM +CN +L DPI Sbjct: 65 LLPMFECNEYLQIGDPI 81 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.332 0.148 0.471 Gapped Lambda K H 0.267 0.0712 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 695,934 Number of extensions: 24213 Number of successful extensions: 70 Number of sequences better than 10.0: 1 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 6 Length of query: 42 Length of database: 5,994,473 Length adjustment: 16 Effective length of query: 26 Effective length of database: 5,648,745 Effective search space: 146867370 Effective search space used: 146867370 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 50 (23.1 bits)