HHsearch alignment for GI: peg_394 and conserved domain: COG1608
>COG1608 Predicted archaeal kinase [General function prediction only].
Probab=99.84 E-value=1.6e-20 Score=133.92 Aligned_cols=138 Identities=26% Similarity=0.452 Sum_probs=112.9
Q ss_pred CCCCEEEECHHHHHHHHHCCCEEEE-CCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCCC-
Q ss_conf 5520135569999999977984998-57431787320066147999999986251133432267633534555556338-
Q 537021.9.peg.3 3 FVGNVIKVNRTILDLLIKSGIIPVI-APIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKNRQLISKLS- 80 (142)
Q Consensus 3 ~~G~v~~vd~~~i~~lL~~g~iPVi-~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~~~i~~i~- 80 (142)
T Consensus 108 ~~gr~~~~~l~~i~~~l~~gfvPvl~GDVv~d~~~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~ 187 (252)
T COG1608 108 FNGRILYTYLEAIKDALEKGFVPVLYGDVVPDDDNGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARL 187 (252)
T ss_pred CCCCEEECHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCC
T ss_conf 17703220299999998769876233346874898548985118999999974987799984578235689874866200
Q ss_pred HHHHHH---HHHCC--CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf 889999---96269--767867899999999998499889995257876899999679986634549
Q 537021.9.peg.3 81 INEART---LIKDG--TISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP 142 (142)
Q Consensus 81 ~~e~~~---l~~~~--~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p 142 (142)
T Consensus 188 l~~i~~~~~~~gs~~~DVTGGi~~Kl~~~~~~~~~~~~-vyi~ng~~~~ni~~-~l~G~~vGT~I~~ 252 (252)
T COG1608 188 LSEIEGRVALGGSGGTDVTGGIAKKLEALLEIARYGKE-VYIFNGNKPENIYR-ALRGENVGTRIDG 252 (252)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCE-EEEECCCCHHHHHH-HHCCCCCCEEECC
T ss_conf 01443234306867621313399999999998735863-89987877778999-9658877548469