HHsearch alignment for GI: peg_394 and conserved domain: PRK12443

Probab=98.98  E-value=1.1e-08  Score=68.59  Aligned_cols=119  Identities=17%  Similarity=0.209  Sum_probs=84.1

Q ss_pred             EECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCC-CCCEEECCC------CCCCCCCH
Q ss_conf             55699999999779849985743178732006614799999998625113343226-763353455------55563388
Q 537021.9.peg.3    9 KVNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTD-VPGVLDKNR------QLISKLSI   81 (142)
Q Consensus         9 ~vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltd-v~Gv~d~~~------~~i~~i~~   81 (142)
T Consensus       112 ~y~~~rA~~~LekG~VVIfa----gGTGnP~fT-TDtaAaLrA~Ei~Ad~lL~at~~VDGVYd~DP~k~~dA~k~~~ls~  186 (247)
T PRK12443        112 PYIRLRAVHHLDNGYIVIFG----GGNGQPFVT-TDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNY  186 (247)
T ss_pred             CCCHHHHHHHHHCCCEEEEE----CCCCCCCCC-CCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCH
T ss_conf             77789999997369789997----887887520-4399999998828613321056657764689889997544433379


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHHH-HCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf             899999626976786789999999999-8499889995257876899999679986634549
Q 537021.9.peg.3   82 NEARTLIKDGTISGGMIPKIETSIKAI-ENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP  142 (142)
Q Consensus        82 ~e~~~l~~~~~~~~gm~~Ki~~a~~a~-~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p  142 (142)
T Consensus       187 ~e~l~--~~L~v---M--D~-tA~~lc~~~~ip-i~Vfn~~~~g~l~ka~-~Ge~iGT~V~~  238 (247)
T PRK12443        187 NDVVR--QNIQV---M--DQ-AALLLARDYNLP-AHVFNFDEPGVMRRIC-LGEHVGTLIND  238 (247)
T ss_pred             HHHHH--CCCCC---H--HH-HHHHHHHHCCCC-EEEECCCCCCHHHHHH-CCCCCCEEECC
T ss_conf             99998--69944---2--99-999999973998-8998289986399996-79986328818