HHsearch alignment for GI: peg_394 and conserved domain: cd04246

>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.19  E-value=1.6e-10  Score=78.74  Aligned_cols=118  Identities=24%  Similarity=0.309  Sum_probs=87.4

Q ss_pred             EEEECHHHHHHHHHCCCEEEECC-CCCCCCCCEECC---CHHHHHHHHHHHHCHHHHHHHCCCCCEEECCC------CCC
Q ss_conf             13556999999997798499857-431787320066---14799999998625113343226763353455------555
Q 537021.9.peg.3    7 VIKVNRTILDLLIKSGIIPVIAP-IAPGYDGATYNI---NADTFAGAIAEKLNVIRLLFLTDVPGVLDKNR------QLI   76 (142)
Q Consensus         7 v~~vd~~~i~~lL~~g~iPVi~p-ig~~~~G~~~ni---n~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~------~~i   76 (142)
T Consensus       111 i~~~~~~~~~~~l~~~~v~Vv~GF~g~~~~G~~ttLGRGGSD~tAa~iA~~l~A~~v~iwTDVdGi~taDPr~v~~A~~i  190 (239)
T cd04246         111 IIDIDPKRILEALEEGDVVVVAGFQGVNEDGEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKL  190 (239)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCC
T ss_conf             33530556665552454479733234489985688179964799999999728888999718972573899968766572


Q ss_pred             CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEE
Q ss_conf             6338889999962697678678999999999984998899952578768999996799866345
Q 537021.9.peg.3   77 SKLSINEARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLL  140 (142)
Q Consensus        77 ~~i~~~e~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i  140 (142)
T Consensus       191 ~~lsy~EA~ela~~Ga--kVlhp--~ti~p~~~~~Ip-i~I~nt----------~~~-~~GT~I  238 (239)
T cd04246         191 DVISYDEMLEMASLGA--KVLHP--RSVELAKKYNVP-LRVRSS----------FSE-NPGTLI  238 (239)
T ss_pred             CCCCHHHHHHHHHCCC--CCCCH--HHHHHHHHCCCC-EEEEEC----------CCC-CCCCEE
T ss_conf             7527999999986898--42589--999999986995-899848----------989-898775