HHsearch alignment for GI: peg_394 and conserved domain: cd04259

>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=98.78  E-value=4e-08  Score=65.53  Aligned_cols=111  Identities=26%  Similarity=0.322  Sum_probs=79.7

Q ss_pred             HHHHH-HCCCEEEEC-CCCCCCCCCEECC---CHHHHHHHHHHHHCHHHHHHHCCCCCEEECCC------CCCCCCCHHH
Q ss_conf             99999-779849985-7431787320066---14799999998625113343226763353455------5556338889
Q 537021.9.peg.3   15 LDLLI-KSGIIPVIA-PIAPGYDGATYNI---NADTFAGAIAEKLNVIRLLFLTDVPGVLDKNR------QLISKLSINE   83 (142)
Q Consensus        15 i~~lL-~~g~iPVi~-pig~~~~G~~~ni---n~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~------~~i~~i~~~e   83 (142)
T Consensus       173 ~~~~l~~~~~v~v~~GFig~~~~G~~tTLGRgGSDyTAa~ia~~l~A~~v~IwtDV~Gi~taDPr~v~~A~~i~~lsy~E  252 (295)
T cd04259         173 LQKRLADGAQLIITQGFIARNAHGETVLLGRGGSDTSAAYFAAKLQAARCEIWTDVPGLFTANPHEVPHARLLKRLDYDE  252 (295)
T ss_pred             HHHHHCCCCEEEEECCCCEECCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCHHH
T ss_conf             99875149859996784345699987772589730589999997499879999777767568987688884657338999


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEE
Q ss_conf             999962697678678999999999984998899952578768999996799866345
Q 537021.9.peg.3   84 ARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLL  140 (142)
Q Consensus        84 ~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i  140 (142)
T Consensus       253 A~eLa~~Ga--kVlHp--~t~~p~~~~~Ip-i~Irnt----------~~p~~~GT~I  294 (295)
T cd04259         253 AQEIATMGA--KVLHP--RCIPPARRANIP-MVVRST----------ERPELSGTLI  294 (295)
T ss_pred             HHHHHHCCC--CCCCH--HHHHHHHHCCCC-EEEECC----------CCCCCCCEEE
T ss_conf             999996798--41689--999999984991-899289----------9999998266