HHsearch results for GI: peg_394 and protein with PDBid: 2va1_A
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.32 E-value=1.1e-11 Score=84.04 Aligned_cols=123 Identities=20% Similarity=0.226 Sum_probs=89.0
Q ss_pred CEEEECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECC------CCCCCCC
Q ss_conf 0135569999999977984998574317873200661479999999862511334322676335345------5555633
Q 537021.9.peg.3 6 NVIKVNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKN------RQLISKL 79 (142)
Q Consensus 6 ~v~~vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~------~~~i~~i 79 (142)
.........+..+++.+.+|++.... +....-+.|.+|+.+|....|+.++++||++|+||.+ .++|+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dd~~a~~~a~~~~ad~li~~tdVdGvyd~dP~~~~dA~~i~~i 202 (256)
T 2va1_A 127 LVHESSANNIKKAIEKEQVMIFVAGT----GFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHI 202 (256)
T ss_dssp TCEECCHHHHHHHHHTTCEEEEESTT----SSSSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEE
T ss_pred HHHHHHHHHHHHHHCCCCEEECCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCC
T ss_conf 67777899999986179552006877----65678766199999999877799774027884565898768775212435
Q ss_pred CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEC
Q ss_conf 88899999626976786789999999999849988999525787689999967998663454
Q 537021.9.peg.3 80 SINEARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLI 141 (142)
Q Consensus 80 ~~~e~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~ 141 (142)
+..+... .+ ...| |+.++.-+.++|++ ++|+||+.|+.|. +++.++.+||+|-
T Consensus 203 s~~e~~~---~g--~~~m--d~~Aa~la~~~gi~-~~I~ng~~~~~i~-~~l~Ge~vGTlIs 255 (256)
T 2va1_A 203 TFNMALT---QN--LKVM--DATALALCQENNIN-LLVFNIDKPNAIV-DVLEKKNKYTIVS 255 (256)
T ss_dssp EHHHHHH---HT--CCSS--CHHHHHHHHHTTCE-EEEEESSSTTHHH-HHHTTCSCEEEEE
T ss_pred CHHHHHH---CC--CCCH--HHHHHHHHHHCCCC-EEEECCCCCCHHH-HHHCCCCCCEEEC
T ss_conf 7999975---78--7417--99999999987997-8998189965899-9977999842870