HHsearch results for GI: peg_394 and protein with PDBid: 2va1_A

>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.32  E-value=1.1e-11  Score=84.04  Aligned_cols=123  Identities=20%  Similarity=0.226  Sum_probs=89.0

Q ss_pred             CEEEECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECC------CCCCCCC
Q ss_conf             0135569999999977984998574317873200661479999999862511334322676335345------5555633
Q 537021.9.peg.3    6 NVIKVNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKN------RQLISKL   79 (142)
Q Consensus         6 ~v~~vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~------~~~i~~i   79 (142)
                      .........+..+++.+.+|++....    +....-+.|.+|+.+|....|+.++++||++|+||.+      .++|+++
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dd~~a~~~a~~~~ad~li~~tdVdGvyd~dP~~~~dA~~i~~i  202 (256)
T 2va1_A          127 LVHESSANNIKKAIEKEQVMIFVAGT----GFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHI  202 (256)
T ss_dssp             TCEECCHHHHHHHHHTTCEEEEESTT----SSSSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEE
T ss_pred             HHHHHHHHHHHHHHCCCCEEECCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCC
T ss_conf             67777899999986179552006877----65678766199999999877799774027884565898768775212435


Q ss_pred             CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEC
Q ss_conf             88899999626976786789999999999849988999525787689999967998663454
Q 537021.9.peg.3   80 SINEARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLI  141 (142)
Q Consensus        80 ~~~e~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~  141 (142)
                      +..+...   .+  ...|  |+.++.-+.++|++ ++|+||+.|+.|. +++.++.+||+|-
T Consensus       203 s~~e~~~---~g--~~~m--d~~Aa~la~~~gi~-~~I~ng~~~~~i~-~~l~Ge~vGTlIs  255 (256)
T 2va1_A          203 TFNMALT---QN--LKVM--DATALALCQENNIN-LLVFNIDKPNAIV-DVLEKKNKYTIVS  255 (256)
T ss_dssp             EHHHHHH---HT--CCSS--CHHHHHHHHHTTCE-EEEEESSSTTHHH-HHHTTCSCEEEEE
T ss_pred             CHHHHHH---CC--CCCH--HHHHHHHHHHCCCC-EEEECCCCCCHHH-HHHCCCCCCEEEC
T ss_conf             7999975---78--7417--99999999987997-8998189965899-9977999842870