HHSEARCH alignment of GI: peg_394 and SCOP domain: d2brxa1

Alignment
>d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.83  E-value=3.8e-21  Score=134.88  Aligned_cols=123  Identities=20%  Similarity=0.268  Sum_probs=101.6

Q ss_pred             ECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEEC------CCCCCCCCCHHH
Q ss_conf             56999999997798499857431787320066147999999986251133432267633534------555556338889
Q 537021.9.peg.3   10 VNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDK------NRQLISKLSINE   83 (142)
Q Consensus        10 vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~------~~~~i~~i~~~e   83 (142)
                      -+..-...+++.+.+|++..      ++.+. ++|.+|+.+|..++|++|+|+|||+|||+.      +.++|++++.+|
T Consensus        94 ~~~~~~~~~l~~~~ipv~~~------~~~~~-~~D~lAa~lA~~l~Ad~lii~TDVdGVyt~dP~~~~~Ak~i~~i~~~e  166 (225)
T d2brxa1          94 EDFWEAWKAVQLKKIPVMGG------THPGH-TTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEE  166 (225)
T ss_dssp             CSHHHHHHHHHTTCBCEECC------CSTTC-CHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHH
T ss_pred             CCHHHHHHHHHHCCCCCCCC------CCCCC-CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCH
T ss_conf             56999999987420122368------99875-410999999997083343320234554201212466554522871326


Q ss_pred             HHHHHHCCC---CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf             999962697---67867899999999998499889995257876899999679986634549
Q 537021.9.peg.3   84 ARTLIKDGT---ISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP  142 (142)
Q Consensus        84 ~~~l~~~~~---~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p  142 (142)
                      +.++...+.   .++||..|+ +|..+.++|++ ++|+||+.|+.|. ++|+++++||+|.|
T Consensus       167 ~~~~~~~~~~~~g~gg~~~k~-Aa~~a~~~gi~-v~I~ng~~~~~l~-~~l~ge~~GT~i~P  225 (225)
T d2brxa1         167 LLEIVGKGIEKAGSSSVIDPL-AAKIIARSGIK-TIVIGKEDAKDLF-RVIKGDHNGTTIEP  225 (225)
T ss_dssp             HHHHHHC--------CCSCHH-HHHHHHHHTCC-EEEECHHHHTCHH-HHHTTCSSSEEECC
T ss_pred             HHHHHCCCCCCCCCCCCCCHH-HHHHHHHCCCC-EEEEECCCCCHHH-HHHCCCCCCCEECC
T ss_conf             888850686336888743699-99999987995-8998289963699-99779999717649


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Carbamate kinase-like
superfamily: Carbamate kinase-like
family: PyrH-like
domain: Uridylate kinase PyrH
species: Pyrococcus furiosus [TaxId: 2261]