HHsearch alignment for GI: peg_409 and conserved domain: COG0552
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion].
Probab=95.36 E-value=0.031 Score=35.44 Aligned_cols=69 Identities=14% Similarity=0.094 Sum_probs=42.4
Q ss_pred HHHHHHHCCCHH--HHHHHCCCCC--EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 897323509489--9998276888--79984888996799999999998247898895667768789999999
Q 537021.9.peg.4 12 ETIDLISQTKSE--QLLASDPTRS--AWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSH 80 (242)
Q Consensus 12 ~~~~~~~~~~~q--q~~a~~~~~~--~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~ 80 (242)
T Consensus 116 ~l~~il~~~~~~~~~~~~~~~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~ 188 (340)
T COG0552 116 ALIEILRPVDKVDLPLEIPKEKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEV 188 (340)
T ss_pred HHHHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 9999846554444365523589867999993488863717999999999789869998233478999999999