HHsearch alignment for GI: peg_409 and conserved domain: COG0630

>COG0630 VirB11 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis [Cell motility and secretion / Intracellular trafficking and secretion].

Probab=90.73  E-value=0.29  Score=28.60  Aligned_cols=30  Identities=30%  Similarity=0.488  Sum_probs=22.9

Q ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             9827688879984888996799999999998
Q 537021.9.peg.4   26 LASDPTRSAWVSANAGSGKTHILVQRVLRLL   56 (242)
Q Consensus        26 ~a~~~~~~~lV~A~aGSGKT~tL~~rv~~ll   56 (242)
T Consensus       138 ~~ie~~~siii~G~t~sGKTt~lna-ll~~I  167 (312)
T COG0630         138 LAIEARKSIIICGGTASGKTTLLNA-LLDFI  167 (312)
T ss_pred             HHHHCCCCEEEECCCCCCHHHHHHH-HHHHC
T ss_conf             9997699499988888864959999-98637