HHsearch alignment for GI: peg_409 and conserved domain: COG1110

Probab=95.59  E-value=0.22  Score=29.47  Aligned_cols=77  Identities=18%  Similarity=0.104  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHCC--CHHHHHHH---CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             888897323509--48999982---7688879984888996799999999998247898895667768789999999999
Q 537021.9.peg.4    9 EHSETIDLISQT--KSEQLLAS---DPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVL   83 (242)
Q Consensus         9 ~~~~~~~~~~~~--~~qq~~a~---~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~   83 (242)
T Consensus        70 ~~~~fF~k~~G~~~ws~QR~WakR~~rg~SFaiiAPTGvGKTTfg~~~sl~~a~kg---kr~yii~PT~~Lv~Q~~~kl~  146 (1187)
T COG1110          70 EFEEFFKKATGFRPWSAQRVWAKRLVRGKSFAIIAPTGVGKTTFGLLMSLYLAKKG---KRVYIIVPTTTLVRQVYERLK  146 (1187)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHH
T ss_conf             99999998638986078899999987378448982788765479999999987558---749999667899999999999


Q ss_pred             HHHHH
Q ss_conf             99677
Q 537021.9.peg.4   84 EIITA   88 (242)
Q Consensus        84 ~~l~~   88 (242)
T Consensus       147 ~~~e~  151 (1187)
T COG1110         147 KFAED  151 (1187)
T ss_pred             HHHHH
T ss_conf             98865