HHsearch alignment for GI: peg_409 and conserved domain: COG1224
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=90.72 E-value=0.32 Score=28.29 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=23.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf 688879984888996799999999998247898
Q 537021.9.peg.4 30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHP 62 (242)
Q Consensus 30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P 62 (242)
T Consensus 64 aGrgiLi~GppgTGKTAlA~-gIa~eLG~dvPF 95 (450)
T COG1224 64 AGRGILIVGPPGTGKTALAM-GIARELGEDVPF 95 (450)
T ss_pred CCCEEEEECCCCCCHHHHHH-HHHHHHCCCCCC
T ss_conf 66179997899976889999-999985899982