HHsearch alignment for GI: peg_409 and conserved domain: COG1224

>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=90.72  E-value=0.32  Score=28.29  Aligned_cols=32  Identities=22%  Similarity=0.287  Sum_probs=23.5

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf             688879984888996799999999998247898
Q 537021.9.peg.4   30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHP   62 (242)
Q Consensus        30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P   62 (242)
T Consensus        64 aGrgiLi~GppgTGKTAlA~-gIa~eLG~dvPF   95 (450)
T COG1224          64 AGRGILIVGPPGTGKTALAM-GIARELGEDVPF   95 (450)
T ss_pred             CCCEEEEECCCCCCHHHHHH-HHHHHHCCCCCC
T ss_conf             66179997899976889999-999985899982