HHsearch alignment for GI: peg_409 and conserved domain: COG4096
>COG4096 HsdR Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].
Probab=93.08 E-value=0.29 Score=28.65 Aligned_cols=48 Identities=21% Similarity=0.279 Sum_probs=35.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8887998488899679999999999824789889566776878999999
Q 537021.9.peg.4 31 TRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMS 79 (242)
Q Consensus 31 ~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~ 79 (242)
T Consensus 185 ~~raLlvMATGTGKTrTAiaii~rL~r~~-~~KRVLFLaDR~~Lv~QA~ 232 (875)
T COG4096 185 QNRALLVMATGTGKTRTAIAIIDRLIKSG-WVKRVLFLADRNALVDQAY 232 (875)
T ss_pred CCEEEEEEECCCCCCEEHHHHHHHHHHCC-HHHEEEEEECHHHHHHHHH
T ss_conf 74489997058885231999999999614-1430567612678999999