HHsearch alignment for GI: peg_409 and conserved domain: KOG1802

Probab=97.97  E-value=4.6e-06  Score=62.39  Aligned_cols=66  Identities=18%  Similarity=0.235  Sum_probs=54.0

Q ss_pred             HCCCHHHHHHH-C-CCCCE-EEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             50948999982-7-68887-998488899679999999999824789889566776878999999999999
Q 537021.9.peg.4   18 SQTKSEQLLAS-D-PTRSA-WVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEI   85 (242)
Q Consensus        18 ~~~~~qq~~a~-~-~~~~~-lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~   85 (242)
T Consensus       409 pkLN~SQ~~AV~~VL~rplsLIQGPPGTGKTvtsa~IVyhl~~~~~--~~VLvcApSNiAVDqLaeKIh~t  477 (935)
T KOG1802         409 PKLNASQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLARQHA--GPVLVCAPSNIAVDQLAEKIHKT  477 (935)
T ss_pred             HHHCHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHCC--CCEEEECCCCHHHHHHHHHHHHC
T ss_conf             1224678999999975985155469998833116899999998528--95699816500289999999861