HHsearch alignment for GI: peg_409 and conserved domain: KOG2108

Probab=99.12  E-value=6.1e-11  Score=96.70  Aligned_cols=81  Identities=30%  Similarity=0.333  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHCC-CCCEEEEECCCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0788888973235094899998276-888799848889967999999999982-47898895667768789999999999
Q 537021.9.peg.4    6 SFQEHSETIDLISQTKSEQLLASDP-TRSAWVSANAGSGKTHILVQRVLRLLL-ANAHPSTLLCLTHTKAAAAEMSHRVL   83 (242)
Q Consensus         6 ~~~~~~~~~~~~~~~~~qq~~a~~~-~~~~lV~A~aGSGKT~tL~~rv~~ll~-~g~~P~~IL~lTFT~kAA~El~~RI~   83 (242)
T Consensus         2 ~~~~i~d--s~~~~l~~~q~~~~~~~~~~~rviagpgsgkt~~lt~~v~yli~~~~ik~~eI~~~t~tnka~~~~~~~l~   79 (853)
T KOG2108           2 SNRGIWD--SLYSLLNKSQRFSALSPLRRKRVIAGPGSGKTLVLTERVAYLINFNNIKPDEILINTGTNKAADSIKLNLI   79 (853)
T ss_pred             CCCHHHH--HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             8720667--76665312201554388760203106877852103477778874268888989887468810789998688


Q ss_pred             HHHHH
Q ss_conf             99677
Q 537021.9.peg.4   84 EIITA   88 (242)
Q Consensus        84 ~~l~~   88 (242)
T Consensus        80 ~il~~   84 (853)
T KOG2108          80 AILRT   84 (853)
T ss_pred             HHHCC
T ss_conf             87537