HHsearch alignment for GI: peg_409 and conserved domain: PRK00254
>PRK00254 ski2-like helicase; Provisional.
Probab=94.76 E-value=0.075 Score=32.78 Aligned_cols=65 Identities=23% Similarity=0.187 Sum_probs=46.5
Q ss_pred HHCCCHHHHHHHC----CCCCEEEEECCCCCHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3509489999827----6888799848889967999999999-982478988956677687899999999999
Q 537021.9.peg.4 17 ISQTKSEQLLASD----PTRSAWVSANAGSGKTHILVQRVLR-LLLANAHPSTLLCLTHTKAAAAEMSHRVLE 84 (242)
Q Consensus 17 ~~~~~~qq~~a~~----~~~~~lV~A~aGSGKT~tL~~rv~~-ll~~g~~P~~IL~lTFT~kAA~El~~RI~~ 84 (242)
T Consensus 21 I~~l~p~Q~e~l~~g~~~g~NllvsaPT~sGKTlvAElail~~~l~~~---~k~iyi~P~kALa~EK~~~f~~ 90 (717)
T PRK00254 21 IEELYPPQAEALTSGVLEGKNLLIAIPTASGKTLIAEIAMVNKLLREG---GKAVYLVPLKALAEEKFREFKD 90 (717)
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC---CEEEEECCHHHHHHHHHHHHHH
T ss_conf 872689999998742336981899899887489999999999998529---9299992679999999999987