HHsearch alignment for GI: peg_409 and conserved domain: PRK00771
>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=93.28 E-value=0.12 Score=31.38 Aligned_cols=52 Identities=17% Similarity=0.094 Sum_probs=33.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79984888996799999999998247898895667768789999999999996
Q 537021.9.peg.4 34 AWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEII 86 (242)
Q Consensus 34 ~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l 86 (242)
T Consensus 100 im~vGlqGsGKTTT~aKLA~~~kk~g~kv~lvaaDt~RpaA~eQ-L~~la~~~ 151 (433)
T PRK00771 100 ILLVGLQGSGKTTTAAKLARYFQKKGLKVGVICADTWRPGAYEQ-LKQLCEKI 151 (433)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH-HHHHHHHC
T ss_conf 99973788978999999999999779946785067883689999-99999863