HHsearch alignment for GI: peg_409 and conserved domain: PRK05580

Probab=96.29  E-value=0.0068  Score=40.09  Aligned_cols=66  Identities=23%  Similarity=0.210  Sum_probs=52.6

Q ss_pred             CCHHHHHHHC------CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9489999827------68887998488899679999999999824789889566776878999999999999677
Q 537021.9.peg.4   20 TKSEQLLASD------PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIITA   88 (242)
Q Consensus        20 ~~~qq~~a~~------~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~~   88 (242)
T Consensus       169 L~~eQ~~a~~~i~~~~~~~~~LL~GvTGSGKTevYl~li~~~l~~G---kqvLiLvPEI~lt~q~~~rl~~~fg~  240 (699)
T PRK05580        169 LNEEQAAALAAIRAAGGFSAFLLDGVTGSGKTEVYLQAIAEALAQG---KQALVLVPEIALTPQLLARFRARFGA  240 (699)
T ss_pred             CCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf             8999999999998558887178747898607999999999999739---97899917678789999999987099