HHsearch alignment for GI: peg_409 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=94.55 E-value=0.03 Score=35.52 Aligned_cols=47 Identities=23% Similarity=0.236 Sum_probs=34.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6888799848889967999999999982478988956677687899999999999
Q 537021.9.peg.4 30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLE 84 (242)
Q Consensus 30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~ 84 (242)
T Consensus 182 ~~~nLlf~G~~G~GKTfLa~~IA~ell~~g~---sViy~ta~-----~L~~~l~~ 228 (330)
T PRK06835 182 NNENLLFYGNTGTGKTFLSNCIAKELLDRGK---TVIYRTSD-----ELIENLRE 228 (330)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCC---EEEEEEHH-----HHHHHHHH
T ss_conf 8886698899999889999999999998799---49996299-----99999999