HHsearch alignment for GI: peg_409 and conserved domain: PRK08084

>PRK08084 DNA replication initiation factor; Provisional.
Probab=93.32  E-value=0.18  Score=30.05  Aligned_cols=39  Identities=13%  Similarity=0.246  Sum_probs=25.0

Q ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             768887998488899679999999999824789889566776
Q 537021.9.peg.4   29 DPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTH   70 (242)
Q Consensus        29 ~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTF   70 (242)
T Consensus        43 ~~~~~l~l~G~~G~GKTHLLqA~~~~~~~~~---~~~~yl~~   81 (235)
T PRK08084         43 EHSGYIYLWGREGAGRSHLLHAACAELSQRG---DAVGYVPL   81 (235)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHCCC---CCEEEEEH
T ss_conf             8987699989999888999999999997079---85799877