HHsearch alignment for GI: peg_409 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.
Probab=91.96  E-value=0.089  Score=32.24  Aligned_cols=55  Identities=18%  Similarity=0.210  Sum_probs=27.8

Q ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHH-CCCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf             88799848889967999999999982-47898895667-7687899999999999967
Q 537021.9.peg.4   32 RSAWVSANAGSGKTHILVQRVLRLLL-ANAHPSTLLCL-THTKAAAAEMSHRVLEIIT   87 (242)
Q Consensus        32 ~~~lV~A~aGSGKT~tL~~rv~~ll~-~g~~P~~IL~l-TFT~kAA~El~~RI~~~l~   87 (242)
T Consensus         2 ~rI~IiG~~GsGKST-lAr~L~~~~~ip~~~LD~l~w~~~w~~~~~~e~~~~~~~~~~   58 (167)
T PRK08118          2 KKIILIGSGGSGKST-LARQLGEKLNIPVHHLDALFWKPNWEGVPKEEQRTVQNELVK   58 (167)
T ss_pred             CEEEEECCCCCCHHH-HHHHHHHHHCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             679998899987999-999999988969796443476689946888999999999983