HHsearch alignment for GI: peg_409 and conserved domain: PRK08118
>PRK08118 topology modulation protein; Reviewed.
Probab=91.96 E-value=0.089 Score=32.24 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=27.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHH-CCCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 88799848889967999999999982-47898895667-7687899999999999967
Q 537021.9.peg.4 32 RSAWVSANAGSGKTHILVQRVLRLLL-ANAHPSTLLCL-THTKAAAAEMSHRVLEIIT 87 (242)
Q Consensus 32 ~~~lV~A~aGSGKT~tL~~rv~~ll~-~g~~P~~IL~l-TFT~kAA~El~~RI~~~l~ 87 (242)
T Consensus 2 ~rI~IiG~~GsGKST-lAr~L~~~~~ip~~~LD~l~w~~~w~~~~~~e~~~~~~~~~~ 58 (167)
T PRK08118 2 KKIILIGSGGSGKST-LARQLGEKLNIPVHHLDALFWKPNWEGVPKEEQRTVQNELVK 58 (167)
T ss_pred CEEEEECCCCCCHHH-HHHHHHHHHCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 679998899987999-999999988969796443476689946888999999999983